From 7e4004e000db5021c054e5386dabb9b774ac0fd8 Mon Sep 17 00:00:00 2001 From: shuang Date: Mon, 14 Oct 2024 06:07:10 +0000 Subject: [PATCH] update zh doc --- docs/zh_CN/source/tutorials/get_celltype.md | 32 ++++++++++----------- 1 file changed, 16 insertions(+), 16 deletions(-) diff --git a/docs/zh_CN/source/tutorials/get_celltype.md b/docs/zh_CN/source/tutorials/get_celltype.md index ed0f904..2702e16 100644 --- a/docs/zh_CN/source/tutorials/get_celltype.md +++ b/docs/zh_CN/source/tutorials/get_celltype.md @@ -133,9 +133,9 @@ sc.pl.umap(adata, color=["leiden", "celltype_manual", "celltypes_gbi"], legend_l ## cluster geneset 0 ### Gene List -``` +\``` LDHB, LTB, RGCC, IL32, NOSIP, CD3D, CD3E, TMEM123, VIM, TMEM66, FYB, JUNB, CCR7, CD27, MYL12A -``` +\``` ### Celltype Prediction #### Optimal Celltype: T Cells (likely CD4+ T cells) @@ -166,9 +166,9 @@ LDHB, LTB, RGCC, IL32, NOSIP, CD3D, CD3E, TMEM123, VIM, TMEM66, FYB, JUNB, CCR7, ## cluster geneset 1 ### Gene List -``` +\``` CD79A,HLA-DRA,MS4A1,CD79B,CD74,HLA-DPB1,HLA-DRB1,HLA-DQA1,CD37,HLA-DPA1,HLA-DQB1,LINC00926,LTB,TCL1A,HLA-DRB5 -``` +\``` ### Celltype Prediction #### Optimal Celltype: B cells @@ -208,9 +208,9 @@ CD79A,HLA-DRA,MS4A1,CD79B,CD74,HLA-DPB1,HLA-DRB1,HLA-DQA1,CD37,HLA-DPA1,HLA-DQB1 ## cluster geneset 2 ### Gene List -``` +\``` FCGR3A, LST1, MT2A, FCER1G, IFITM2, AIF1, LILRA3, RHOC, IFITM3, STXBP2, PSAP, SAT1, NINJ1, MS4A7, ABI3 -``` +\``` ### Celltype Prediction #### Optimal Celltype: Monocytes @@ -266,9 +266,9 @@ FCGR3A, LST1, MT2A, FCER1G, IFITM2, AIF1, LILRA3, RHOC, IFITM3, STXBP2, PSAP, SA ## cluster geneset 3 ### Gene List -``` +\``` GNLY, GZMB, FGFBP2, NKG7, PRF1, CTSW, TYROBP, FCGR3A, SPON2, XCL2, FCER1G, GZMA, HOPX, ID2, PLAC8 -``` +\``` ### Celltype Prediction #### Optimal Celltype: NK Cells @@ -299,9 +299,9 @@ GNLY, GZMB, FGFBP2, NKG7, PRF1, CTSW, TYROBP, FCGR3A, SPON2, XCL2, FCER1G, GZMA, ## cluster geneset 4 ### Gene List -``` +\``` CCL5, GZMK, NKG7, CST7, CD3D, GZMA, CTSW, CD8A, KLRG1, GZMH, IL32, LYAR, S100A6, NCR3, HCST -``` +\``` ### Celltype Prediction #### Optimal Celltype: Cytotoxic T Cells (CD8+ T Cells) @@ -341,9 +341,9 @@ CCL5, GZMK, NKG7, CST7, CD3D, GZMA, CTSW, CD8A, KLRG1, GZMH, IL32, LYAR, S100A6, ## cluster geneset 5 ### Gene List -``` +\``` S100A8, LYZ, S100A9, LGALS2, FCN1, CD14, GSTP1, FTL, MS4A6A, CFD, NPC2, TYROBP, GRN, APOBEC3A, GPX1 -``` +\``` ### Celltype Prediction #### Optimal Celltype: Monocytes @@ -374,9 +374,9 @@ S100A8, LYZ, S100A9, LGALS2, FCN1, CD14, GSTP1, FTL, MS4A6A, CFD, NPC2, TYROBP, ## cluster geneset 6 ### Gene List -``` +\``` FCER1A, HLA-DQA1, HLA-DPB1, CLEC10A, HLA-DQB1, HLA-DRA, HLA-DPA1, CST3, LYZ, HLA-DRB1, CD74, HLA-DQA2, HLA-DMA, HLA-DRB5, SRSF7 -``` +\``` ### Celltype Prediction #### Optimal Celltype: Dendritic Cells (DCs) @@ -407,9 +407,9 @@ FCER1A, HLA-DQA1, HLA-DPB1, CLEC10A, HLA-DQB1, HLA-DRA, HLA-DPA1, CST3, LYZ, HLA ## cluster geneset 7 ### Gene List -``` +\``` PPBP, PF4, GNG11, GPX1, SDPR, NRGN, CCL5, SPARC, HIST1H2AC, TPM4, CLU, TUBB1, RGS10, GP9, TAGLN2 -``` +\``` ### Celltype Prediction #### Optimal Celltype: Platelets