Automated report

hubmapconsortium · Sep 12, 2022 · 5d29ef1 · 5d29ef1
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diff --git a/graphs/ccf_Blood_graph.pdf b/graphs/ccf_Blood_graph.pdf
diff --git a/graphs/ccf_Blood_vasculature_graph.pdf b/graphs/ccf_Blood_vasculature_graph.pdf
diff --git a/graphs/ccf_Bone-Marrow_graph.pdf b/graphs/ccf_Bone-Marrow_graph.pdf
diff --git a/graphs/ccf_Brain_graph.pdf b/graphs/ccf_Brain_graph.pdf
diff --git a/graphs/ccf_Eye_graph.pdf b/graphs/ccf_Eye_graph.pdf
diff --git a/graphs/ccf_Fallopian_tube_graph.pdf b/graphs/ccf_Fallopian_tube_graph.pdf
diff --git a/graphs/ccf_Heart_graph.pdf b/graphs/ccf_Heart_graph.pdf
diff --git a/graphs/ccf_Kidney_graph.pdf b/graphs/ccf_Kidney_graph.pdf
diff --git a/graphs/ccf_Knee_graph.pdf b/graphs/ccf_Knee_graph.pdf
diff --git a/graphs/ccf_Large_intestine_graph.pdf b/graphs/ccf_Large_intestine_graph.pdf
diff --git a/graphs/ccf_Liver_graph.pdf b/graphs/ccf_Liver_graph.pdf
diff --git a/graphs/ccf_Lung_graph.pdf b/graphs/ccf_Lung_graph.pdf
diff --git a/graphs/ccf_Lymph_node_graph.pdf b/graphs/ccf_Lymph_node_graph.pdf
diff --git a/graphs/ccf_Lymph_vasculature_graph.pdf b/graphs/ccf_Lymph_vasculature_graph.pdf
diff --git a/graphs/ccf_Ovary_graph.pdf b/graphs/ccf_Ovary_graph.pdf
diff --git a/graphs/ccf_Pancreas_graph.pdf b/graphs/ccf_Pancreas_graph.pdf
diff --git a/graphs/ccf_Peripheral_nervous_system_graph.pdf b/graphs/ccf_Peripheral_nervous_system_graph.pdf
diff --git a/graphs/ccf_Placenta_graph.pdf b/graphs/ccf_Placenta_graph.pdf
diff --git a/graphs/ccf_Prostate_graph.pdf b/graphs/ccf_Prostate_graph.pdf
diff --git a/graphs/ccf_Skin_graph.pdf b/graphs/ccf_Skin_graph.pdf
diff --git a/graphs/ccf_Small_intestine_graph.pdf b/graphs/ccf_Small_intestine_graph.pdf
diff --git a/graphs/ccf_Spinal_Cord_graph.pdf b/graphs/ccf_Spinal_Cord_graph.pdf
diff --git a/graphs/ccf_Spleen_graph.pdf b/graphs/ccf_Spleen_graph.pdf
diff --git a/graphs/ccf_Thymus_graph.pdf b/graphs/ccf_Thymus_graph.pdf
diff --git a/graphs/ccf_Ureter_graph.pdf b/graphs/ccf_Ureter_graph.pdf
diff --git a/graphs/ccf_Urinary_bladder_graph.pdf b/graphs/ccf_Urinary_bladder_graph.pdf
diff --git a/graphs/ccf_Uterus_graph.pdf b/graphs/ccf_Uterus_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Blood_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Blood_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Blood_vasculature_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Blood_vasculature_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Bone-Marrow_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Bone-Marrow_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Brain_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Brain_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Eye_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Eye_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Fallopian_tube_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Fallopian_tube_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Heart_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Heart_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Kidney_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Kidney_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Knee_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Knee_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Large_intestine_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Large_intestine_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Liver_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Liver_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Lung_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Lung_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Lymph_node_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Lymph_node_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Lymph_vasculature_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Lymph_vasculature_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Ovary_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Ovary_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Pancreas_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Pancreas_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Peripheral_nervous_system_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Peripheral_nervous_system_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Prostate_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Prostate_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Skin_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Skin_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Small_intestine_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Small_intestine_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Spleen_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Spleen_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Thymus_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Thymus_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Ureter_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Ureter_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Urinary_bladder_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Urinary_bladder_graph.pdf
diff --git a/graphs/last_official_ASCTB_release/ccf_Uterus_graph.pdf b/graphs/last_official_ASCTB_release/ccf_Uterus_graph.pdf
diff --git a/logs/report_images_Blood_vasculature.tsv b/logs/report_images_Blood_vasculature.tsv
@@ -118,8 +118,8 @@ UBERON:0001641	https://upload.wikimedia.org/wikipedia/commons/b/bd/Gray488_blue.
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@@ -181,8 +181,8 @@ UBERON:0007317	http://upload.wikimedia.org/wikipedia/commons/4/43/Gray549.png
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diff --git a/logs/report_images_Brain.tsv b/logs/report_images_Brain.tsv
@@ -1,8 +1,8 @@
 term	image_url
 UBERON:0000052	http://upload.wikimedia.org/wikipedia/commons/2/21/Gray747.png
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-UBERON:0000956	http://upload.wikimedia.org/wikipedia/commons/7/7b/Cerebral_Cortex_location.jpg
 UBERON:0000956	http://upload.wikimedia.org/wikipedia/commons/9/9a/Brainmaps-macaque-hippocampus.jpg
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@@ -31,8 +31,8 @@ UBERON:0002150	http://upload.wikimedia.org/wikipedia/commons/9/97/Gray704.png
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 UBERON:0002289	http://upload.wikimedia.org/wikipedia/commons/d/da/Cn3nucleus.png

diff --git a/logs/report_images_Heart.tsv b/logs/report_images_Heart.tsv
@@ -12,11 +12,11 @@ UBERON:0002134	http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the
 UBERON:0002135	http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg
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-UBERON:0002351	http://upload.wikimedia.org/wikipedia/commons/d/de/Sinoatrial_node_2_low_mag.jpg
 UBERON:0002351	http://upload.wikimedia.org/wikipedia/commons/d/d2/Sinoatrial_node_low_mag.jpg
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 UBERON:0002352	http://upload.wikimedia.org/wikipedia/commons/5/50/ConductionsystemoftheheartwithouttheHeart.png
-UBERON:0002353	http://upload.wikimedia.org/wikipedia/commons/5/50/ConductionsystemoftheheartwithouttheHeart.png
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 UBERON:0002353	http://upload.wikimedia.org/wikipedia/commons/b/b6/ECG_Principle_fast.gif
+UBERON:0002353	http://upload.wikimedia.org/wikipedia/commons/5/50/ConductionsystemoftheheartwithouttheHeart.png
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 UBERON:0006958	http://upload.wikimedia.org/wikipedia/commons/5/57/Gray556.png
diff --git a/logs/report_images_Knee.tsv b/logs/report_images_Knee.tsv
@@ -2,8 +2,8 @@ term	image_url
 UBERON:0001437	http://upload.wikimedia.org/wikipedia/commons/9/94/Illu_long_bone.jpg
 UBERON:0001465	http://upload.wikimedia.org/wikipedia/commons/8/8d/Male_Knee_by_David_Shankbone.jpg
 UBERON:0001485	http://upload.wikimedia.org/wikipedia/commons/c/ca/Knee.agr.jpg
-UBERON:0002018	http://upload.wikimedia.org/wikipedia/commons/5/5d/Synovium.png
 UBERON:0002018	http://upload.wikimedia.org/wikipedia/commons/1/19/Joint.png
+UBERON:0002018	http://upload.wikimedia.org/wikipedia/commons/5/5d/Synovium.png
 UBERON:0002371	http://upload.wikimedia.org/wikipedia/commons/7/74/Gray72-en.svg
 UBERON:0002446	https://upload.wikimedia.org/wikipedia/commons/9/9a/Knee_diagram.svg
 UBERON:0002483	http://upload.wikimedia.org/wikipedia/commons/3/34/Illu_compact_spongy_bone.jpg

diff --git a/logs/report_images_Lung.tsv b/logs/report_images_Lung.tsv
@@ -11,7 +11,7 @@ UBERON:0002184	http://upload.wikimedia.org/wikipedia/commons/d/df/Illu_quiz_lung
 UBERON:0002187	https://upload.wikimedia.org/wikipedia/commons/d/db/Alveoli_diagram.png
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 UBERON:0003126	http://upload.wikimedia.org/wikipedia/commons/9/9f/Illu_conducting_passages.svg
+UBERON:0003126	http://upload.wikimedia.org/wikipedia/commons/c/c3/Illu_conducting_passages.jpg
 UBERON:0003604	http://upload.wikimedia.org/wikipedia/commons/5/56/Gray952.png
 UBERON:0006679	http://upload.wikimedia.org/wikipedia/commons/f/f2/Diagrama_de_los_pulmones-c.svg
diff --git a/logs/report_images_Ovary.tsv b/logs/report_images_Ovary.tsv
@@ -2,10 +2,10 @@ term	image_url
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 UBERON:0000086	http://upload.wikimedia.org/wikipedia/commons/8/81/Gray3.png
 UBERON:0000156	http://upload.wikimedia.org/wikipedia/commons/5/50/Mature_Graffian_follicle.jpg
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-UBERON:0001305	http://upload.wikimedia.org/wikipedia/commons/c/ca/Human_ovarian_follicle.jpg
+UBERON:0000992	https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png
 UBERON:0001305	https://upload.wikimedia.org/wikipedia/commons/e/e6/Primary_follicle-4.JPG
+UBERON:0001305	http://upload.wikimedia.org/wikipedia/commons/c/ca/Human_ovarian_follicle.jpg
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 UBERON:0002512	http://upload.wikimedia.org/wikipedia/commons/5/57/Folliclesinovary.jpg
diff --git a/logs/report_images_Peripheral_nervous_system.tsv b/logs/report_images_Peripheral_nervous_system.tsv
@@ -7,8 +7,8 @@ UBERON:0001322	http://upload.wikimedia.org/wikipedia/commons/3/3a/Gray1244.png
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@@ -22,8 +22,8 @@ UBERON:0001759	http://upload.wikimedia.org/wikipedia/commons/5/5e/Gray791.png
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diff --git a/logs/report_images_Placenta.tsv b/logs/report_images_Placenta.tsv
@@ -2,8 +2,8 @@ term	image_url
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diff --git a/logs/report_images_Skin.tsv b/logs/report_images_Skin.tsv
@@ -1,7 +1,7 @@
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diff --git a/logs/report_images_Uterus.tsv b/logs/report_images_Uterus.tsv
@@ -1,6 +1,6 @@
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 UBERON:0000995	https://upload.wikimedia.org/wikipedia/commons/c/cb/Female_anatomy.png
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