v2.3.32

• Update rules to include vitessce-hints
• Update GeoMx to use RNASeq (with probes)
• Add rule for Xenium.
• Update requests package to 2.32.3 due to 2.32.0 conflicts with CVE-2024-35195 mitigation
• imc-2d-v2 rule chain update

Full Changelog: v2.3.31...v2.3.32

v2.3.31

Handle calls to the /assaytype or /assaytype/metadata endpoints for samples or donors with 400 error

Full Changelog: v2.3.30...v2.3.31

v2.3.30

• New endpoint to support Collection DOI registration
• Update rules to add additional oligo_probe_panels.
• Update to commons 2.1.18

Full Changelog: v2.3.29...v2.3.30

v2.3.29

• Add rules for EPICs and Seg Masks
• Visium dir schema updates
• Update to IVT v0.0.24
• Integrate entity-api's POST /constraints to the metadata validation with IVT
• New docker base image

Full Changelog: v2.3.28...v2.3.29

v2.3.28

• Rules: Add rule for derived phenocycler datasets
• Tech debt cleanups. The two main pieces are
  • Removed PUT /datasets/status which no need to test since PSC team stopped using it a while ago
  • Internal updates made in PUT /datasets/<uuid>/submit to stop using specimen.py and switch to the new sample_helper.py.

Full Changelog: v2.3.27...v2.3.28

v2.3.27

Support hubmap_id lookup in URL of datasets/{uuid}/file-system-abs-path to handle 404 properly

Full Changelog: v2.3.26...v2.3.27

v2.3.26

Hot fix parsing handling for /uploads/data-status

What's Changed

• for update_upload_datastatus, wrapped convert_str_literal in a try bl… by @yuanzhou in #618

Full Changelog: v2.3.25...v2.3.26

v2.3.25

Hot fix bug returning abs path for uploads

What's Changed

• fix bug returning abs path for uploads by @shirey in #613

Full Changelog: v2.3.24...v2.3.25

v2.3.24

Support to publish Multi-Assay Component datasets

What's Changed

• Support to publish Multi-Assay Component datasets by @shirey in #612

Full Changelog: v2.3.23...v2.3.24

v2.3.23

• Add a limitation in bulk sample/donor upload that raises a 400 error if a tsv includes more than 40 content rows and suggests users splits it up
• Use apscheduler to schedule a singular job right after the server starts along with the normal hourly jobs

Full Changelog: v2.3.22...v2.3.23