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Releases: hubmapconsortium/ingest-api

v2.3.12

26 Apr 17:23
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Add rule for MUSIC

v2.3.11

25 Apr 12:44
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Two new endpoints and config to support UBKG Download via UMLS key auth

Full Changelog: v2.3.10...v2.3.11

v2.3.10

22 Apr 21:00
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Fix broken integration of datasets bulk submission to entity-api and removed reference to SenNet ingest file helper.

Full Changelog: v2.3.9...v2.3.10

v2.3.9

21 Apr 04:40
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Rules: Add rule for 10x multiome derived

Full Changelog: v2.3.8...v2.3.9

v2.3.8

15 Apr 14:00
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New endpoint PUT /datasets/bulk/submit to support submitting multiple Datasets for processing

v2.3.7

10 Apr 11:31
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  • New endpoint GET /privs/has-data-admin
  • Modify dataset_is_primary to prevent component datasets from appearing in the ingest board
  • A wide set of rule changes including using the creation action to properly classify entities, and removing the check for non-DCWG vs DCWG for processed datasets
  • New endpoints to retrieve the file-system-abs-path for multiple datasets at one time

v2.3.6

21 Mar 17:27
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  • Enable metadata.json generation at dataset publish time with file directory fixes
  • Reduce processed_datasets query scope to only return necessary fields
  • Format globus url for processed datasets using the same source of truth

Full Changelog: v2.3.5...v2.3.6

v2.3.5

08 Mar 14:50
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  • Data Ingest Board support of processed datasets, and removal of descendants
  • Update rule for RNAseq Visium (no probes)
  • Rules: dataset type should be Cell DIVE not Cell Dive
  • Rules: Update description to be Cell DIVE not CellDIVE
  • Rules: Update dag_prov_list logic such that it is always set

v2.3.4

01 Mar 18:21
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  • Add is-multi-assay field in value set that is returned for primary multiassay datasets and their related processed datasets
  • Add rules for older json-based CODEX and RNAseq
  • Rule for derived datasets can't identify Visium as is_dcwg from the entity-api, updating the rule to treat it as non_dcwg in the meantime.
  • Adding vitessce-hints for Visium (no probes) derived dataset.
  • Comparison values are chnaged to lower case because that is what entity-api returns in the entity object for the given field
  • Disable metadata.json file generation during publication

Full Changelog: v2.3.3...v2.3.4

v2.3.3

20 Feb 02:08
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  • Fix full prov metadata json to use the latest dataset details
  • Use != operator instead of 'is not' identity check