Fix structure prefix for tools/re* pages.

i-VRESSE · Feb 20, 2024 · 1406e6f · 1406e6f
1 parent bd6a99c
commit 1406e6f
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Showing 3 changed files with 8 additions and 3 deletions.
diff --git a/app/routes/jobs.$id.tools.reclustfcc.$module.tsx b/app/routes/jobs.$id.tools.reclustfcc.$module.tsx
@@ -90,7 +90,7 @@ export const loader = async ({ params, request }: LoaderFunctionArgs) => {
       scatterSelection,
       boxSelection,
       moduleName: "clustfcc",
-      structurePrefix: "../../files/output/",
+      structurePrefix: `/jobs/${jobid}/files/output/foo/bar/`,
     });
   }
 

diff --git a/app/routes/jobs.$id.tools.reclustrmsd.$module.tsx b/app/routes/jobs.$id.tools.reclustrmsd.$module.tsx
@@ -87,7 +87,7 @@ export const loader = async ({ params, request }: LoaderFunctionArgs) => {
       scatterSelection,
       boxSelection,
       moduleName: "clustrmsd",
-      structurePrefix: "../../files/output/",
+      structurePrefix: `/jobs/${jobId}/files/output/foo/bar/`,
     });
   }
   return json({

diff --git a/app/routes/jobs.$id.tools.rescore.$module.tsx b/app/routes/jobs.$id.tools.rescore.$module.tsx
@@ -60,7 +60,12 @@ export const loader = async ({ params, request }: LoaderFunctionArgs) => {
     moduleIndexPadding,
     scatterSelection,
     boxSelection,
-    structurePrefix: "../../files/output/",
+    // report.html has path to pdb of ../../11_seletopclusts/cluster_2_model_1.pdb.gz
+    // this page is rendered at /jobs/52/tools/rescore/12?i=1
+    // the pdb file can be downloaed at /jobs/52/files/output/11_seletopclusts/cluster_1_model_1.pdb.gz
+    // so we need to do some path manipulation,
+    // with foo/bar/ negating the ../../ in the path
+    structurePrefix: `/jobs/${jobId}/files/output/foo/bar/`,
   });
   return json({
     moduleIndex,