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the final paper.md for our joss publication

Co-authored-by: Wei Ji <23487320+weiji14@users.noreply.github.com>
Co-authored-by: Tyler Sutterley <tsutterl@uw.edu>
Co-authored-by: Romina Piunno <romina.piunno@gmail.com>
Co-authored-by: aaarendt <arendta@uw.edu>
Co-authored-by: Kelsey Bisson <48059682+kelseybisson@users.noreply.github.com>
Co-authored-by: Zach Fair <48361714+zachghiaccio@users.noreply.github.com>
Co-authored-by: liuzheng-arctic <51420076+liuzheng-arctic@users.noreply.github.com>
Co-authored-by: Don Setiawan <landungs@uw.edu>
Co-authored-by: Tian Li <tian.li@bristol.ac.uk>
Co-authored-by: Friedrich Knuth <friedrichknuth@users.noreply.github.com>
Co-authored-by: Raphael Hagen <norlandrhagen@gmail.com>
Co-authored-by: Shashank Bhushan <sbaglapl@uw.edu>
Co-authored-by: nitin-ravinder <86551841+nitin-ravinder@users.noreply.github.com>
Co-authored-by: learn2phoenix <74139166+learn2phoenix@users.noreply.github.com>
Co-authored-by: Scott Henderson <scottyh@uw.edu>
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210 changes: 128 additions & 82 deletions doc/source/tracking/icepyx_pubs.bib
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% ######### materials about icepyx ################
@misc{2022_IS2-HW-tutorials,
author = {Scheick, Jessica and
Arendt, Anthony and
Haley, Charley and
Henderson, Scott and
Koh, Jane and
Setiawan, Don and
Alterman, Naomi and
Meyer, Joachim and
Cristea, Nicoleta and
Schweiger, Axel and
Barciauskas, Aimee and
Smith, Ben and
Piunno, Romina and
Shapero, Daniel and
Fair, Zachary and
Arndt, Philipp and
Leong, Wei Ji and
Sutterley, Tyler and
Snow, Tasha and
Beig, Mikala and
Besso, Hannah and
Liu, Zheng and
Joughin, Ian and
Bisson, Kelsey and
Sauthoff, Wilson},
title = {ICESat-2 Hackweek Website},
month = apr,
year = 2022,
note = {If you use this book, please cite it as below.},
publisher = {Zenodo},
version = {2022.04.15},
doi = {10.5281/zenodo.6462479},
url = {https://doi.org/10.5281/zenodo.6462479}
author = {Scheick, J. and
Arendt, Anthony and
Haley, Charley and
Henderson, Scott and
Koh, Jane and
Setiawan, Don and
Alterman, Naomi and
Meyer, Joachim and
Cristea, Nicoleta and
Schweiger, Axel and
Barciauskas, Aimee and
Smith, Ben and
Piunno, Romina and
Shapero, Daniel and
Fair, Zachary and
Arndt, Philipp and
Leong, Wei Ji and
Sutterley, Tyler and
Snow, Tasha and
Beig, Mikala and
Besso, Hannah and
Liu, Zheng and
Joughin, Ian and
Bisson, Kelsey and
Sauthoff, Wilson},
title = {ICESat-2 Hackweek Website},
month = apr,
year = 2022,
note = {If you use this book, please cite it as below.},
publisher = {Zenodo},
version = {2022.04.15},
doi = {10.5281/zenodo.6462479},
url = {https://doi.org/10.5281/zenodo.6462479}
}

@misc{js2021agu,
author = {Scheick, J and Bisson, K and Li, T and Leong, WJ and Arendt, A},
@article{js2021agu,
author = {Scheick, Jessica and Bisson, Kelsey and Li, Tian and Leong, Wei Ji and Arendt, Anthony},
note = {Abstract and poster (presented by Wei Ji Leong). American Geophysical Union Fall Meeting, New Orleans, LA, USA. 13-17 December 2021.},
title = {Collaborative Computational Resource Development around {ICESat-2} Data: the {icepyx} Community and Library},
year = {2021},
journal = {Earth and Space Science Open Archive},
pages = {9},
year = {2022},
DOI = {10.1002/essoar.10511316.1},
url = {https://doi.org/10.1002/essoar.10511316.1},
comment = {abstract, poster},
}

@misc{js2020agu,
author = {Scheick, J and Arendt, A and Heagy, L and Paolo, F and Perez, F and Steiker, A},
author = {Scheick, J. and Arendt, A. and Heagy, L. and Paolo, F. and Perez, F. and Steiker, A.},
note = {Abstract and eLightning (poster + presentation). American Geophysical Union Fall Meeting, virtual, USA. 1-17 December 2020.},
title = {{\texttt{icepyx}: Developing Community and Software Around ICESat-2 Data}},
year = {2020},
comment = {abstract, poster, talk},
}

@misc{2020_IS2-HW-tutorials,
author = {Arendt, Anthony and
Scheick, Jessica and
Shean, David and
Buckley, Ellen and
Grigsby, Shane and
Haley, Charley and
Heagy, Lindsey and
Mohajerani, Yara and
Neumann, Tom and
Nilsson, Johan and
Markus, Thorsten and
Paolo, Fernando S. and
Perez, Fernando and
Petty, Alek and
Schweiger, Axel and
Smith, Benjamin and
Steiker, Amy and
Alvis, Sebastian and
Henderson, Scott and
Holschuh, Nick and
Liu, Zheng and
Sutterley, Tyler},
title = {2020 {ICESat-2 Hackweek Tutorials}},
month = aug,
year = 2020,
publisher = {Zenodo},
version = {1.0.0},
doi = {10.5281/zenodo.3966463},
url = {https://doi.org/10.5281/zenodo.3966463},
comment = {tutorials}
author = {Arendt, Anthony and
Scheick, Jessica and
Shean, David and
Buckley, Ellen and
Grigsby, Shane and
Haley, Charley and
Heagy, Lindsey and
Mohajerani, Yara and
Neumann, Tom and
Nilsson, Johan and
Markus, Thorsten and
Paolo, Fernando S. and
Perez, Fernando and
Petty, Alek and
Schweiger, Axel and
Smith, Benjamin and
Steiker, Amy and
Alvis, Sebastian and
Henderson, Scott and
Holschuh, Nick and
Liu, Zheng and
Sutterley, Tyler},
title = {2020 {ICESat-2 Hackweek Tutorials}},
month = aug,
year = 2020,
publisher = {Zenodo},
version = {1.0.0},
doi = {10.5281/zenodo.3966463},
url = {https://doi.org/10.5281/zenodo.3966463},
comment = {tutorials}
}

@misc{js2019agu,
author = {Scheick, J and Arendt, A and Heagy, L and Perez, F},
author = {Scheick, J. and Arendt, A. and Heagy, L. and Perez, F.},
note = {Abstract and poster. American Geophysical Union Fall Meeting, San Francisco, California, USA. 9-13 December 2019.},
title = {{Introducing} icepyx, an open source {Python} library for obtaining and working with {ICESat-2} data},
year = {2019},
Expand All @@ -96,8 +100,6 @@ @misc{js2019agu

% ######### Articles citing icepyx ################
@article{Bisson:2021,
author = {Bisson, K. M. and Cael, B. B.},
title = {How Are Under Ice Phytoplankton Related to Sea Ice in the Southern Ocean?},
Expand Down Expand Up @@ -138,21 +140,65 @@ @Article{Li:2020
}


% ######### Articles about ICESat-2 ################
@article{is2,
title = {The Ice, Cloud, and land Elevation Satellite-2 (ICESat-2): Science requirements, concept, and implementation},
journal = {Remote Sensing of Environment},
volume = {190},
pages = {260-273},
year = {2017},
issn = {0034-4257},
doi = {10.1016/j.rse.2016.12.029},
url = {https://www.sciencedirect.com/science/article/pii/S0034425716305089},
author = {Thorsten Markus and Tom Neumann and Anthony Martino and Waleed Abdalati and Kelly Brunt and Beata Csatho and Sinead Farrell and Helen Fricker and Alex Gardner and David Harding and Michael Jasinski and Ron Kwok and Lori Magruder and Dan Lubin and Scott Luthcke and James Morison and Ross Nelson and Amy Neuenschwander and Stephen Palm and Sorin Popescu and CK Shum and Bob E. Schutz and Benjamin Smith and Yuekui Yang and Jay Zwally},
keywords = {ICESat-2, Land ice, Sea ice, Vegetation, Climate change, Satellite mission},
abstract = {The Ice, Cloud, and land Elevation Satellite (ICESat) mission used laser altimetry measurements to determine changes in elevations of glaciers and ice sheets, as well as sea ice thickness distribution. These measurements have provided important information on the response of the cryopshere (Earth's frozen surfaces) to changes in atmosphere and ocean condition. ICESat operated from 2003 to 2009 and provided repeat altimetry measurements not only to the cryosphere scientific community but also to the ocean, terrestrial and atmospheric scientific communities. The conclusive assessment of significant ongoing rapid changes in the Earth's ice cover, in part supported by ICESat observations, has strengthened the need for sustained, high accuracy, repeat observations similar to what was provided by the ICESat mission. Following recommendations from the National Research Council for an ICESat follow-on mission, the ICESat-2 mission is now under development for planned launch in 2018. The primary scientific aims of the ICESat-2 mission are to continue measurements of sea ice freeboard and ice sheet elevation to determine their changes at scales from outlet glaciers to the entire ice sheet, and from 10s of meters to the entire polar oceans for sea ice freeboard. ICESat carried a single beam profiling laser altimeter that produced ~70m diameter footprints on the surface of the Earth at ~150m along-track intervals. In contrast, ICESat-2 will operate with three pairs of beams, each pair separated by about 3km cross-track with a pair spacing of 90m. Each of the beams will have a nominal 17m diameter footprint with an along-track sampling interval of 0.7m. The differences in the ICESat-2 measurement concept are a result of overcoming some limitations associated with the approach used in the ICESat mission. The beam pair configuration of ICESat-2 allows for the determination of local cross-track slope, a significant factor in measuring elevation change for the outlet glaciers surrounding the Greenland and Antarctica coasts. The multiple beam pairs also provide improved spatial coverage. The dense spatial sampling eliminates along-track measurement gaps, and the small footprint diameter is especially useful for sea surface height measurements in the often narrow leads needed for sea ice freeboard and ice thickness retrievals. The ICESat-2 instrumentation concept uses a low energy 532nm (green) laser in conjunction with single-photon sensitive detectors to measure range. Combining ICESat-2 data with altimetry data collected since the start of the ICESat mission in 2003, such as Operation IceBridge and ESA's CryoSat-2, will yield a 15+ year record of changes in ice sheet elevation and sea ice thickness. ICESat-2 will also provide information of mountain glacier and ice cap elevations changes, land and vegetation heights, inland water elevations, sea surface heights, and cloud layering and optical thickness.}
}

% ######### Research/Articles using (but not citing) icepyx ################
@article{Sothe:2022,
title={Spatially Continuous Mapping of Forest Canopy Height in Canada by Combining GEDI and ICESat-2 with PALSAR and Sentinel},
volume={14},
ISSN={2072-4292},
url={http://dx.doi.org/10.3390/rs14205158},
DOI={10.3390/rs14205158},
number={20},
journal={Remote Sensing},
publisher={MDPI AG},
author={Sothe, Camile and Gonsamo, Alemu and Lourenço, Ricardo B. and Kurz, Werner A. and Snider, James},
year={2022},
month={Oct},
@article{Sothe:2022,
title={Spatially Continuous Mapping of Forest Canopy Height in Canada by Combining GEDI and ICESat-2 with PALSAR and Sentinel},
volume={14},
ISSN={2072-4292},
url={http://dx.doi.org/10.3390/rs14205158},
DOI={10.3390/rs14205158},
number={20},
journal={Remote Sensing},
publisher={MDPI AG},
author={Sothe, Camile and Gonsamo, Alemu and Lourenço, Ricardo B. and Kurz, Werner A. and Snider, James},
year={2022},
month={Oct},
pages={5158},
note={Attribution to icepyx from 15 Oct 2022 Twitter post, https://twitter.com/rblourenco/status/1581320878511382528}
}


% ######### Related Software ################
@misc{SR,
author = {JP Swinski and
Eric Lidwa and
Tyler Sutterley and
David Shean and
Joseph H Kennedy and
Scott Henderson},
title = {ICESat2-SlideRule/sliderule: v2.1.0},
month = mar,
year = 2023,
publisher = {Zenodo},
version = {v2.1.0},
doi = {10.5281/zenodo.7705009},
url = {https://doi.org/10.5281/zenodo.7705009}
}

@misc{OA,
author = {Khalsa, S.J.S. and Borsa, A. and Nandigam, V. and others},
title = {{OpenAltimetry} - rapid analysis and visualization of Spaceborne altimeter data},
year = 2020,
publisher = {Earth Sci Inform},
doi = {10.1007/s12145-020-00520-2},
url = {https://openaltimetry.org/}
}
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