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Releases: icgc-argo/argo-dictionary

1.26

23 Oct 21:08
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  • fix the script to treat the value 0 not as falsy values. by @lindaxiang in #441

Full Changelog: 1.24...1.26

1.24

01 Oct 15:24
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1.23

20 Aug 19:46
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1.22

18 Apr 17:46
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1.21

07 Feb 22:13
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Full Changelog: 1.19...1.21

1.19

19 Oct 00:53
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  • #358: New optional field called lost_to_followup_after_clinical_event_id added to Donor table to allow data submitters to indicate whether donor was lost to follow up after a clinical event.
  • #413: New permissible term Physician assessed progressive disease added to response_to_treatment field in Treatment table.
  • #405: Updated regular expression condition for all identifier fields to prevent invalid characters from being submitted.
  • #392: New permissible terms (Cell line – derived from metastatic tumour and Xenograft – derived from metastatic tumour) added to specimen_type field in Sample Registration table.

1.18

25 Aug 16:15
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#407: Updated validation script for conditional fields tumour_grade, lymph_nodes_examined_method to take into account clinical exception values.
#409: Updated validation script for conditional fields prescribed_cumulative_drug_dose and actual_cumulative_drug_dose to take into account clinical exception values.

1.17

11 May 16:50
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  • #400 Updated anatomic_site_progression_or_recurrence field in Follow Up schema to accept multiple values.
  • #388 Added new required field for percent_tumour_cells_measurement_method in Specimen schema.
  • #340 Added new permissible term Tumour - unknown if derived from primary or metastatic to specimen_type field in the Sample Registration schema.

1.16

07 Feb 22:34
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  • #365 Added new term Unknown primary site to the controlled terminology for the "primary_site" field in the Donor schema.
  • #364 Added 6 new terms (Supportive, Diagnostic, Preventative, Guidance, Screening, Forensic) to the controlled terminology for the "treatment_intent" field in the Treatment schema.
  • #363 Added 8 new terms (Conditioning, Induction, Locally advanced, Maintenance, Mobilization, Preventative, Radiosensitization, Salvage) to the controlled terminology for the "treatment_setting" field in the Treatment schema. The term "Not applicable" was removed. If required, programs will need to apply for a clinical exception.
  • #356 Removed Unknown from "is_primary_treatment" field. If required, programs will need to apply for a clinical exception.
  • #378 Added a new required "response_to_treatment_criteria_method" field in the Treatment schema. This field consists of a list of response criteria methods, in addition to RECIST. Added new terms for response criteria in the existing "response_to_treatment" field in the Treatment schema. The value submitted in this field will be validated against the "response_to_treatment_criteria_method" field to ensure the correct response criteria term is submitted.
  • #377 Added a new required "lymph_nodes_examined_method" field in the Primary Diagnosis schema.
  • #366 Updated validation to permit the "pathological/clinical_m_category" field in the Primary Diagnosis and Specimen schemas to be submitted as "Not applicable" if AJCC 7th or 8th editions used.
  • #376 Changed data tier for the "recurrence_tumour_staging_system" field in the Follow Up schema so it is no longer a core field.
  • #354 Updated foreignKey attribute for ID fields in the Specimen, Treatment, Follow up and Biomarker schemas.
  • #379 Added new "prescribed_cumulative_drug_dose" field and renamed existing "cumulative_drug_dose" field to "actual_cumulative_drug_dose" in the Chemotherapy and Hormone Therapy schemas. Either field can be submitted. Replaced term dosage with dose for consistency purposes.
  • #393 Added new fields for "prescribed_cumulative_drug_dose" and "actual_cumulative_drug_dose" in the Immunotherapy schema. Either field can be submitted.
  • Corrected term Revised International staging system (RISS) in the tumour_staging_system fields to "R-ISS" instead of "RISS".

1.15

26 Sep 19:11
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  • 355 Added four new terms ('Hemithyroidectomy', 'Near-total thyroidectomy', 'Subtotal thyroidectomy' and 'Total thyroidectomy') to the controlled terminology for the surgery_type field in the Surgery table....by @hknahal in #360