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toy_example_params.txt
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toy_example_params.txt
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--config ./jsonFiles/toyexample_mixtral_latest.json --initialize --input data/GO_term_analysis/toy_example_w_contaminated.csv --input_sep ',' --set_index GO --gene_column Genes --gene_sep ' ' --start 0 --end 10 --output_file data/GO_term_analysis/LLM_processed_toy_example_w_contamination_mixtral_latest
--config ./jsonFiles/toyexample_llama2_70b.json --initialize --input data/GO_term_analysis/toy_example_w_contaminated.csv --input_sep ',' --set_index GO --gene_column Genes --gene_sep ' ' --start 0 --end 10 --output_file data/GO_term_analysis/LLM_processed_toy_example_w_contamination_llama2_70b
--config ./jsonFiles/toyexample_llama2_7b.json --initialize --input data/GO_term_analysis/toy_example_w_contaminated.csv --input_sep ',' --set_index GO --gene_column Genes --gene_sep ' ' --start 0 --end 10 --output_file data/GO_term_analysis/LLM_processed_toy_example_w_contamination_llama2_7b
--config ./jsonFiles/toyexample_gemini_pro.json --initialize --input data/GO_term_analysis/toy_example_w_contaminated.csv --input_sep ',' --set_index GO --gene_column Genes --gene_sep ' ' --start 0 --end 10 --output_file data/GO_term_analysis/LLM_processed_toy_example_w_contamination_gemini_pro
--config ./jsonFiles/toyexample_mistral_7b.json --initialize --input data/GO_term_analysis/toy_example_w_contaminated.csv --input_sep ',' --set_index GO --gene_column Genes --gene_sep ' ' --start 0 --end 10 --output_file data/GO_term_analysis/LLM_processed_toy_example_w_contamination_mistral_7b
--config ./jsonFiles/toyexample_mixtral_instruct.json --initialize --input data/GO_term_analysis/toy_example_w_contaminated.csv --input_sep ',' --set_index GO --gene_column Genes --gene_sep ' ' --start 0 --end 11 --output_file data/GO_term_analysis/LLM_processed_toy_example_w_contamination_mixtral_instruct