diff --git a/docs/tutorial.rst b/docs/tutorial.rst index 735a759..17be058 100644 --- a/docs/tutorial.rst +++ b/docs/tutorial.rst @@ -103,7 +103,7 @@ the drop-down menu as follows:: Select the file and click on ``Import PLY``. You should now see something similar as to the image below. -.. figure:: _static/img/tutorials/genus2_blender_01.JPG +.. figure:: _static/img/tutorials/genus2_blender_01.jpg :alt: The imported Genus 2 isosurface in Blender. Finally, we assign a material to the object, tune the camera to bring the @@ -111,7 +111,7 @@ object fully into view, set the color of the background to black, add two sun-type light sources and set the film to transparent. For the material, we have used the settings as can be seen in the figure below. -.. figure:: _static/img/tutorials/genus2_blender_02.JPG +.. figure:: _static/img/tutorials/genus2_blender_02.jpg :alt: The imported Genus 2 isosurface in Blender. The only step that remains is to render the image, which will give the image @@ -259,4 +259,4 @@ looks as seen in the image below. Finally, we can render the scene to create a nice picture of the molecular orbital. .. figure:: _static/img/tutorials/benzene_homo_result.png - :alt: Benzene highest occupied molecular orbital \ No newline at end of file + :alt: Benzene highest occupied molecular orbital diff --git a/paper/paper.jats b/paper/paper.jats new file mode 100644 index 0000000..e8538bb --- /dev/null +++ b/paper/paper.jats @@ -0,0 +1,85 @@ + + +
+ + + + +Journal of Open Source Software +JOSS + +2475-9066 + +Open Journals + + + +0 +N/A + +Den2Obj: A command line program for producing isosurfaces +from density files + + + +https://orcid.org/0000-0003-1403-8379 + +Filot +I. A. W. + + +* + + + +Inorganic Materials and Catalysis, Department of Chemical +Engineering and Chemistry, Eindhoven University of Technology, +Eindhoven, The Netherlands + + + + +* E-mail: + + +10 +4 +2024 + +¿VOL? +¿ISSUE? +¿PAGE? + +Authors of papers retain copyright and release the +work under a Creative Commons Attribution 4.0 International License (CC +BY 4.0) +2022 +The article authors + +Authors of papers retain copyright and release the work under +a Creative Commons Attribution 4.0 International License (CC BY +4.0) + + + + + + + Summary + + + Statement of need + + + Acknowledgements +

This work was supported by the Netherlands Center for Multiscale + Catalytic Energy Conversion, and NWO Gravitation program funded by the + Ministry of Education, Culture and Science of the government of the + Netherlands. The Netherlands Organization for Scientific Research is + acknowledged for providing access to computational resources.

+ + + + +
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