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@marc-sturm marc-sturm released this 28 Sep 08:22
· 1692 commits to master since this release
2021_09
2300d34

September 2021 release:

  • GenePrioritization: Performs gene prioritization based on list of known disease genes and a PPI graph.
  • GraphStringDb: Creates simple representation of String-DB interaction graph.
  • VcfCheck: improved checking of empty INFO column
  • VcfAnnotateFromBed: added multithread support
  • VcfAnnotateFromVcf: improved memory useage
  • MappingQC: added support for cfDNA samples, improved support for RNA
  • NGSD:
    • removed 'gene' and 'variant_type' columns from 'variant' table
    • added 'germline_het' and 'germline_hom' columns to 'variant' table
    • added method 'shallow WGS' to 'variant_validation' table

Please do not use the auto-generated 'Source code' packages - they will not work!

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