2018_10

October 2018 release:

• Expecting VEP instead of SnpEff annotations in VCFs now (VariantQC, SomaticQC, RohHunter).
• Added GRCh38 support (MappingQC, SomaticQC, SampleGender, SampleSimilarity).
• Added tools: SampleAncestry, VcfCheck.

please do not use the auto-generated 'Source code' packages - they will not work!

2018_06

June 2018 release:

• SampleCorrelation: added new metrics and renamed to SampleSimilarity.
• Added tools: UpdHunter, NGSDExportGenes, BamHighCoverage.
• Removed tool: VcfLeftAlign.

please do not use the auto-generated 'Source code' packages - they will not work!

2018_04

April 2018 release:

• Changed library used for BAM access to htslib (was bamtools).

please do not use the auto-generated source code packages - they will not work!

2018_03

March 2018 release

please do not use the auto-generated source code packages - they will not work!