actions.yml

name: Run tests

on:
  pull_request:

jobs:
  run_notebooks:
    runs-on: ubuntu-20.04
    steps:
    - uses: actions/checkout@v4.1.7
  
    - name: Get changed files
      id: changed-files
      uses: tj-actions/changed-files@v45
      # To compare changes between the current commit and the last pushed remote commit set `since_last_remote_commit: true`. e.g
      # with:
      #   since_last_remote_commit: true
      with:
        files: |
          **.ipynb
  
    - name: Start docker and test container
      if: steps.changed-files.outputs.any_changed == 'true'
      env:
        ALL_CHANGED_FILES: ${{ steps.changed-files.outputs.all_changed_files }}
      run: |
        chmod +x ./tests/launch-test-environment.sh
        ./tests/launch-test-environment.sh
      shell: bash

    - name: Test all changed files
      if: steps.changed-files.outputs.any_changed == 'true'
      env:
        ALL_CHANGED_FILES: ${{ steps.changed-files.outputs.all_changed_files }}
      run: |
        for file in ${ALL_CHANGED_FILES}; do
          echo "$file"
          docker exec jupyter papermill ../$file /dev/null --execution-timeout=1200 --log-level ERROR
        done
    
    - name: Stop docker and test container
      if: steps.changed-files.outputs.any_changed == 'true'
      env:
        ALL_CHANGED_FILES: ${{ steps.changed-files.outputs.all_changed_files }}
      run: |
        docker compose --profile all-services down -v
      shell: bash