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[skip vbump] 583 Prepare release August 2023 #584

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14 changes: 7 additions & 7 deletions DESCRIPTION
Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
Type: Package
Package: chevron
Title: Standard TLGs for Clinical Trials Reporting
Version: 0.2.0.9034
Date: 2023-07-19
Version: 0.2.1
Date: 2023-07-21
Authors@R: c(
person("Benoit", "Falquet", , "benoit.falquet@roche.com", role = c("aut", "cre")),
person("Liming", "Li", , "liming.li@roche.com", role = "aut"),
Expand All @@ -19,20 +19,20 @@ Depends:
Imports:
checkmate (>= 2.0),
dplyr,
dunlin (>= 0.1.3),
dunlin (>= 0.1.4),
forcats (>= 1.0.0),
formatters (>= 0.5.0),
formatters (>= 0.5.1),
ggplot2 (>= 3.4.0),
glue,
magrittr,
methods,
nestcolor (>= 0.1.1),
purrr,
rlang,
rlistings (>= 0.2.2),
rtables (>= 0.6.1),
rlistings (>= 0.2.3),
rtables (>= 0.6.2),
stringr,
tern (>= 0.8.4),
tern (>= 0.8.5),
tibble,
utils
Suggests:
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18 changes: 11 additions & 7 deletions NEWS.md
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@@ -1,16 +1,20 @@
# chevron 0.2.0.9034
# chevron 0.2.1

* Placeholder strings are now replaced during layout creation using `dunlin::render_safe` function.
* New `chevron_catalog` vignette details usage and version of chevron templates.
* The `run` method renders the errors faster thanks to the new internal `do_call` function.
* Add `verbose` argument for `run` method which would print the argument used.
* Add `row_split_var` and `page_var` as argument for some template.
* Update `LBT06` template to use `PARAM` as row split.
* Convert `AVISIT` to factor according to `AVISITN` as order in preprocessing.
* Add `CFBT01` template. `VST01`, `EGT01` and `LBT01` are now all following `CFBT01`. By default parameters are by page displayed.
* The `dataset` slot in `chevron_tlg` class has been removed.
* Add `CFBT01` template. `VST01`, `EGT01` and `LBT01` are now all following `CFBT01`. By default parameters are displayed by page .
* Add `RMPT03`, `RMPT04` and `RMPT05` which follow `RMPT01`.
* Add `COXT01` template. `COXT02` is now based on `COXT01`.
* Add `AET05` and `AET05_ALL` templates.
* Add `LBT15` based on `LBT04`. `LBT04` has new arguments to make it more flexible.
* Update `EGT03` to use `ACTARMCD` as default arm variable, and remove the preprocessing of filtering to "HR".
* Update `EXT01` to allow it to be displayed by `PARCAT2`.
* Add `COXT01` template. `COXT02` is based on `COXT01` now.
* Add `AET05` and `AET05_ALL` template.
* Add `LBT15` based on `LBT04`.
* Update `LBT06` template to use `PARAM` as row split.
* Convert `AVISIT` to factor and order levels according to `AVISITN` in preprocessing.
* Update `MNG01` so that the numeric `jitter` argument controls the width of data spread along the x-axis.

# chevron 0.2.0
Expand All @@ -31,7 +35,7 @@
* Add more templates: `AET01_AESI`, `EGT03`, `EGT05_QTCAT`, `LBT04`, `LBT05`, `LBT07`, `LBT14`, `PDT01`, `PDT02`.
* Deprecation of previous `getter` function like `get_main` to `main` and `main<-`.
* Add `chevron_t`, `chevron_l` and `chevron_g` subclass of `chevron_tlg`.
* Add `script_funs` and `script_args` to obtain string representation of the full code.

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* Update to current templates.

# chevron 0.1.2
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -23,11 +23,11 @@

<!-- markdownlint-enable MD033 -->

`chevron` is a collection of function to create standard tables, listings, and graphs for clinical trials reporting.
`chevron` is a collection of functions to create standard tables, listings, and graphs for clinical trials reporting.

## Installation

It is recommended that you [create and use a GitHub PAT](https://docs.github.com/en/github/authenticating-to-github/keeping-your-account-and-data-secure/creating-a-personal-access-token) to install the latest version of this package. Once you have the PAT, run the following:

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```r
Sys.setenv(GITHUB_PAT = "your_access_token_here")
Expand All @@ -48,10 +48,10 @@

```text
MedDRA System Organ Class A: Drug X B: Placebo C: Combination
MedDRA Preferred Term (N=134) (N=134) (N=132)

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———————————————————————————————————————————————————————————————————————————————————————————————————————
Total number of patients with at least one adverse event 122 (91.0%) 123 (91.8%) 120 (90.9%)
Overall total number of events 609 622 703

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cl A.1
Total number of patients with at least one adverse event 78 (58.2%) 75 (56.0%) 89 (67.4%)
Total number of events 132 130 160
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