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detach io thread output from creation cell #28

detach io thread output from creation cell

detach io thread output from creation cell #28

Workflow file for this run

name: Test ssh
on:
pull_request:
paths:
- ipyparallel/cluster/launcher.py
- ipyparallel/cluster/shellcmd*
- ipyparallel/tests/test_ssh.py
- ipyparallel/tests/test_shellcmd.py
- ci/ssh/**
- .github/workflows/test-ssh.yml
push:
paths:
- ipyparallel/cluster/launcher.py
- ipyparallel/cluster/shellcmd*
- ipyparallel/tests/test_ssh.py
- ipyparallel/tests/test_shellcmd.py
- ci/ssh/**
- .github/workflows/test-ssh.yml
branches-ignore:
- "pre-commit-ci*"
concurrency:
group: >-
${{ github.workflow }}-
${{ github.ref_type }}-
${{ github.event.pull_request.number || github.sha }}
cancel-in-progress: true
env:
# UTF-8 content may be interpreted as ascii and causes errors without this.
LANG: C.UTF-8
IPP_DISABLE_JS: "1"
JUPYTER_PLATFORM_DIRS: "1"
jobs:
test:
runs-on: ${{ matrix.runs_on || 'ubuntu-22.04' }}
timeout-minutes: 45
strategy:
# Keep running even if one variation of the job fail
fail-fast: false
matrix:
include:
- python: "3.9"
- python: "3.12"
runs_on: windows-2022
steps:
- uses: actions/checkout@v4
- name: Get Docker infos
run: |
docker version
docker images
- name: Set up docker-compose for ssh linux launcher
if: ${{ !contains(matrix.runs_on, 'windows') }}
run: |
export DOCKER_BUILDKIT=1
export COMPOSE_DOCKER_CLI_BUILD=1
cd ci/ssh
docker compose up -d --build
# retrieve id_rsa file for public key authentication
mkdir ~/.ssh/
docker cp ssh-sshd-1:/home/ciuser/.ssh/id_rsa ~/.ssh/id_rsa
cat ~/.ssh/id_rsa
#check ssh connection and accept host key (for future ssh commands)
ssh -o "StrictHostKeyChecking no" ciuser@127.0.0.1 -p 2222 -v echo "ssh connection to container succeeded"
- name: Set up docker-compose for ssh windows launcher
if: ${{ contains(matrix.runs_on, 'windows') }}
env:
SSH_HOST: ciuser@127.0.0.1
SSH_PORT: 2222
CODE_ROOT: c:\src\ipyparallel
run: |
cd ci/ssh
# determine host ip and place it as 'static' env variables in corresponding docker compose file (win_Dockerfile_template -> win_Dockerfile)
$env:docker_host_ip=(Get-NetIPConfiguration -InterfaceAlias "Ethernet*").IPv4Address.IPAddress.Trim()
$content = Get-Content "win_Dockerfile_template"
$content | ForEach-Object {
$_ -replace '\${docker_host_ip}', $env:docker_host_ip -replace '\${docker_host_name}', $env:computername
} | Set-Content "win_Dockerfile"
docker compose -f win_docker-compose.yaml up -d --build
# retrieve id_rsa file for public key authentication
mkdir $env:USERPROFILE/.ssh/
docker run ipyparallel-sshd powershell.exe -Command "type C:\Users\ciuser\.ssh\id_rsa" | out-file -encoding ascii $env:USERPROFILE/.ssh/id_rsa
#check ssh connection and accept host key (with arbitrary windows command)
ssh -o "StrictHostKeyChecking no" $env:SSH_HOST -p $env:SSH_PORT -v echo "ssh connection to container succeeded"
# copy ipyparallel code to docker container (use zip, scp and unzip)
ssh $env:SSH_HOST -p $env:SSH_PORT mkdir $env:CODE_ROOT
# zip ipyparallel files (excluding files probably not needed)
cd ../..
$exclude = @("__pycache__", "node_modules", ".yarn")
$files = Get-ChildItem -Path "." -Exclude $exclude
Compress-Archive -Path $files -DestinationPath ipyparallel.zip -CompressionLevel Fastest
# copy file into docker (we need to do it over ssh since docker copy or mount doesn't work in Hyper-V)
scp -P $env:SSH_PORT ipyparallel.zip ${env:SSH_HOST}:${env:CODE_ROOT}
# deflate ipyparallel files
ssh $env:SSH_HOST -p $env:SSH_PORT powershell.exe -Command "Expand-Archive -Path $env:CODE_ROOT\ipyparallel.zip -DestinationPath $env:CODE_ROOT"
# pip install ipyparallel files
#ssh $env:SSH_HOST -p $env:SSH_PORT "echo IPP_DISABLE_JS=$env:IPP_DISABLE_JS"
ssh $env:SSH_HOST -p $env:SSH_PORT "pip install -e file://c:/src/ipyparallel#egg=ipyparallel[test]"
# we need to disable the windows firewall for github runners otherwise the ipyparallel engines cannot connect to the controller.
# obviously, a more precautious adaption of the firewall would be desirable. since an adaption of the firewall is NOT necessary
# for a local standard windows environment, no further improvements were made.
echo "Disable Firewall:"
Set-NetFirewallProfile -Profile Domain, Public, Private -Enabled False
# just see were pip is installed and what libraries are install
echo "Check pip inside container"
ssh $env:SSH_HOST -p $env:SSH_PORT "where pip"
ssh $env:SSH_HOST -p $env:SSH_PORT "pip list"
echo "Check if container can ping the docker host (requires adapted hosts file and firewall disabled)"
docker run ipyparallel-sshd ping -n 1 $env:computername
- name: Install Python ${{ matrix.python }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python }}
cache: pip
- name: Install ipyparallel itself
run: |
pip install --upgrade pip
pip install --no-deps .
- name: Install Python dependencies
run: |
pip install --upgrade ipyparallel[test]
- name: Show environment
run: pip freeze
- name: Run shellcmd tests
run: |
pytest -v --maxfail=2 --cov=ipyparallel ipyparallel/tests/test_shellcmd.py
- name: Run ssh tests
run: |
pytest -v --maxfail=2 --cov=ipyparallel ipyparallel/tests/test_ssh.py
- name: Submit codecov report
uses: codecov/codecov-action@v4