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As discussed previously in PR #6, we should have different BIDS dataset folders inside the data-testing repo for each modality we want to test. We would like to eventually add other datasets such as microscopy in ome-tiff file format, eeg and dwi.
Right now, the microscopy dataset in png file format in under the folder microscopy_png, but the mri anat dataset is at the root of the repo.
We should re-organize the mri anat files into a specific folder for this dataset and update the tests in ivadomed accordingly.
As discussed previously in PR #6, we should have different BIDS dataset folders inside the data-testing repo for each modality we want to test. We would like to eventually add other datasets such as microscopy in ome-tiff file format, eeg and dwi.
Right now, the microscopy dataset in png file format in under the folder
microscopy_png
, but themri anat
dataset is at the root of the repo.We should re-organize the
mri anat
files into a specific folder for this dataset and update the tests in ivadomed accordingly.@ahill187, would you like to look into that?
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