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Explore Multiple Motif Instances

Jinhan Choi edited this page Nov 29, 2022 · 6 revisions

Searching Motif-based Synaptic Chains

Vimo supports the identification of motif chains where a motif is used repeatedly to form a longer synaptic chain. For consecutive searches, a quick menu that allows you to assign a specific neuron ID to a specific node in the search results is provided.

If you assign the bodyID to a specific node by using the context menu located next to the specific node, you can see that the bodyID is assigned as a property of the node.

contextmenu nodeinfo

After adding the constraints, press the search button and explore multiple motif instances.

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Visualizing the Motif Chains

The selection tab shows a list of currently rendered motif instances. The selected motif instance is colored, and other motif instances are grayed out. Also, you can delete the motif instance from the list.

select