Merge branch 'main' of github.com:prody/ProDy into rtbtools_upgrade_fix #1398

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Run time

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Job	Run time
build (2.7)	9m 6s
build (3.8)	29m 32s
build (3.9)	30m 7s
build (3.10)	29m 38s
build (3.11)	33m 32s
build (3.12)	1m 30s
	2h 13m 25s