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jrc_sum159-1 #37

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jonesa3 opened this issue Jun 21, 2024 · 6 comments
Open

jrc_sum159-1 #37

jonesa3 opened this issue Jun 21, 2024 · 6 comments
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@davidackerman
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🎨 manual only small number of nuclei; no predictions needed

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@jonesa3
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jonesa3 commented Jun 21, 2024

No description provided.

@jonesa3 jonesa3 assigned aemmav and unassigned jonesa3 Jun 25, 2024
@aemmav aemmav added the 🎨 manual only small number of nuclei; no predictions needed label Jun 26, 2024
@avweigel avweigel assigned jonesa3 and unassigned aemmav Jun 26, 2024
@jonesa3 jonesa3 assigned davidackerman and unassigned jonesa3 Jun 27, 2024
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jonesa3 commented Jun 27, 2024

skipping connected components (single nucleus id)

@jonesa3
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jonesa3 commented Jun 27, 2024 •
edited
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proofread tif found here: /avetissiane/tiff_slices/jrc_sum159-1/s4_amira_proofread.tif

@yuriyzubov
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/avetissiane/tiff_slices/jrc_sum159-1/s4_amira_proofread.zarr

@yuriyzubov yuriyzubov assigned rinva and unassigned yuriyzubov Jul 1, 2024
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jrc_sum159-1.zarr/recon-1/labels/inference/segmentations/nuc

@rinva
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rinva commented Jul 30, 2024

Image

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/cellmap/nrs/data/jrc_sum159-1/thumbnail_nuc.jpg
Ready for meshes

@rinva rinva assigned davidackerman and unassigned rinva Jul 30, 2024
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rinva commented Aug 27, 2024

DOI created
https://doi.org/10.25378/janelia.26513248 https://figshare.com/s/0e82d2d24523382e5153

@rinva rinva removed their assignment Sep 4, 2024
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@yuriyzubov @davidackerman @rinva @jonesa3 @aemmav