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readme: Added note about /usr/lib64/ for the conda package. See also: #6
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stuarteberg committed Jul 27, 2016
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Expand Up @@ -91,17 +91,21 @@ Once conda is in your system path, call the following to install neuroproof:
% conda create -n CHOOSE_ENV_NAME -c flyem neuroproof

Conda allows builder to create multiple environments. To use the executables
and libraries, set your PATH to the location of PREFIX/CHOOSE_ENV_NAME/bin.
and libraries, set your PATH to the location of `PREFIX/CHOOSE_ENV_NAME/bin`.

Note: this should work on many distributions of linux and on Mac OSX 10.10+. For Mac,
you will need to set DYLD_FALLBACK_LIBRARY_PATH to PREFIX/CHOOSE_ENV_NAME/lib.
Note: This should work on many distributions of linux and on Mac OSX 10.10+. For Mac,
you will need to set `DYLD_FALLBACK_LIBRARY_PATH` to `PREFIX/CHOOSE_ENV_NAME/lib`.

Note: For now, the NeuroProof conda package expects certain files to live in `/usr/lib64/`.
On Ubuntu, you may need to run `sudo ln -s /usr/lib/x86_64-linux-gnu /usr/lib64` to use NeuroProof.
(This is currently tracked as issue [#6](https://github.com/janelia-flyem/NeuroProof/issues/6).)

### Developers' Builder Guide
Developing has never been easier using conda. If you plan to actively modify
the code, first install neuroproof as discussed above. Then clone
this repository into the directory of your choosing. The package cmake
can still be used but the environment variables must be set to point to
the dependencies and libraries stored in PREFIX/CHOOSE_ENV_NAME. NeuroProof
the dependencies and libraries stored in `PREFIX/CHOOSE_ENV_NAME`. NeuroProof
includes a simple wrapper script `configure-for-conda.sh` that simply
calls the [build script][build.sh] from NeuroProof's recipe with the appropriate environment variables.

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