Neuronal Cell-Typing And Classification Using Human Single Neuron Recordings In Parkinson’s Disease Patients

BME1500H Group 5

Jazlynn Xiu Min Tan, Regina Annirood, Georgia Bardaklis, & Xinyi Zhang

This repository contains code for spike sorting and training a classification model for neuronal cell-typing in the subthalamic nucleus and globus pallidus from single neuron recordings in Parkinson's Disease.

1. Spike_sorting.ipynb to sort spikes and produce figures for manual curation
2. Model_training.ipynb:
   A. extract features
   B. prepare dataset
   C. train logistic regression, random forests, SVMs
   D. visualize model results