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M	.setup/build/betaNB.pdf
M	.setup/build/betaNB_1.0.4.9000.tar.gz
A	.setup/latex/bib/quarto.bib
D	.setup/latex/pdf/.gitignore
D	.setup/latex/pdf/betaNB-001-description.pdf
D	.setup/latex/pdf/betaNB-999-session.pdf
D	.setup/latex/pdf/betaNB-zzz-references.pdf
D	.setup/latex/pdf/betaNB-zzz-tests-benchmark.pdf
D	.setup/latex/pdf/betaNB-zzz-tests-external.pdf
D	.setup/latex/pdf/betaNB-zzz-tests-internal.pdf
D	.setup/latex/pdf/betaNB-zzz-tests-staging.pdf
D	.setup/latex/pdf/bib.bib
M	README.md
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jeksterslab committed Jul 7, 2024
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@Article{Wright-1918,
author = {Sewall Wright},
date = {1918-07},
journaltitle = {Genetics},
title = {On the nature of size factors},
doi = {10.1093/genetics/3.4.367},
number = {4},
pages = {367--374},
volume = {3},
publisher = {Oxford University Press ({OUP})},
}
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34 changes: 17 additions & 17 deletions README.md
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Expand Up @@ -98,9 +98,9 @@ BetaNB(nb, alpha = 0.05)
#> Standardized regression slopes
#> type = "pc"
#> est se R 2.5% 97.5%
#> NARTIC 0.4951 0.0724 5000 0.3538 0.6377
#> PCTGRT 0.3915 0.0770 5000 0.2358 0.5383
#> PCTSUPP 0.2632 0.0788 5000 0.1068 0.4183
#> NARTIC 0.4951 0.0721 5000 0.3545 0.6387
#> PCTGRT 0.3915 0.0762 5000 0.2378 0.5386
#> PCTSUPP 0.2632 0.0787 5000 0.1081 0.4124
```

### Other Effect Sizes
Expand All @@ -123,8 +123,8 @@ RSqNB(nb, alpha = 0.05)
#> R-squared and adjusted R-squared
#> type = "pc"
#> est se R 2.5% 97.5%
#> rsq 0.8045 0.0520 5000 0.6926 0.8974
#> adj 0.7906 0.0557 5000 0.6707 0.8900
#> rsq 0.8045 0.0525 5000 0.6909 0.8973
#> adj 0.7906 0.0563 5000 0.6688 0.8900
```

#### Improvement in R-squared
Expand All @@ -137,9 +137,9 @@ DeltaRSqNB(nb, alpha = 0.05)
#> Improvement in R-squared
#> type = "pc"
#> est se R 2.5% 97.5%
#> NARTIC 0.1859 0.0583 5000 0.0827 0.3072
#> PCTGRT 0.1177 0.0488 5000 0.0337 0.2255
#> PCTSUPP 0.0569 0.0331 5000 0.0089 0.1362
#> NARTIC 0.1859 0.0593 5000 0.0815 0.3137
#> PCTGRT 0.1177 0.0489 5000 0.0355 0.2233
#> PCTSUPP 0.0569 0.0340 5000 0.0095 0.1395
```

#### Semipartial Correlation Coefficients
Expand All @@ -152,9 +152,9 @@ SCorNB(nb, alpha = 0.05)
#> Semipartial correlations
#> type = "pc"
#> est se R 2.5% 97.5%
#> NARTIC 0.4312 0.0690 5000 0.2875 0.5542
#> PCTGRT 0.3430 0.0734 5000 0.1835 0.4749
#> PCTSUPP 0.2385 0.0698 5000 0.0946 0.3691
#> NARTIC 0.4312 0.0699 5000 0.2855 0.5601
#> PCTGRT 0.3430 0.0731 5000 0.1884 0.4726
#> PCTSUPP 0.2385 0.0710 5000 0.0976 0.3735
```

#### Squared Partial Correlation Coefficients
Expand All @@ -167,9 +167,9 @@ PCorNB(nb, alpha = 0.05)
#> Squared partial correlations
#> type = "pc"
#> est se R 2.5% 97.5%
#> NARTIC 0.4874 0.0985 5000 0.2786 0.6679
#> PCTGRT 0.3757 0.1074 5000 0.1572 0.5770
#> PCTSUPP 0.2254 0.1142 5000 0.0409 0.4773
#> NARTIC 0.4874 0.0987 5000 0.2832 0.6700
#> PCTGRT 0.3757 0.1090 5000 0.1585 0.5861
#> PCTSUPP 0.2254 0.1147 5000 0.0452 0.4766
```

#### Differences of Standardized Regression Coefficients
Expand All @@ -182,9 +182,9 @@ DiffBetaNB(nb, alpha = 0.05)
#> Differences of standardized regression slopes
#> type = "pc"
#> est se R 2.5% 97.5%
#> NARTIC-PCTGRT 0.1037 0.1322 5000 -0.1486 0.3665
#> NARTIC-PCTSUPP 0.2319 0.1239 5000 -0.0109 0.4793
#> PCTGRT-PCTSUPP 0.1282 0.1269 5000 -0.1201 0.3748
#> NARTIC-PCTGRT 0.1037 0.1308 5000 -0.1498 0.3729
#> NARTIC-PCTSUPP 0.2319 0.1237 5000 -0.0061 0.4790
#> PCTGRT-PCTSUPP 0.1282 0.1255 5000 -0.1077 0.3797
```

## Documentation
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