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M	.setup/build/betaNB.pdf
M	.setup/build/betaNB_1.0.4.9000.tar.gz
A	.setup/latex/bib/quarto.bib
D	.setup/latex/pdf/.gitignore
D	.setup/latex/pdf/betaNB-001-description.pdf
D	.setup/latex/pdf/betaNB-999-session.pdf
D	.setup/latex/pdf/betaNB-zzz-references.pdf
D	.setup/latex/pdf/betaNB-zzz-tests-benchmark.pdf
D	.setup/latex/pdf/betaNB-zzz-tests-external.pdf
D	.setup/latex/pdf/betaNB-zzz-tests-internal.pdf
D	.setup/latex/pdf/betaNB-zzz-tests-staging.pdf
D	.setup/latex/pdf/bib.bib
M	README.md
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jeksterslab committed Jul 8, 2024
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@Article{Wright-1918,
author = {Sewall Wright},
date = {1918-07},
journaltitle = {Genetics},
title = {On the nature of size factors},
doi = {10.1093/genetics/3.4.367},
number = {4},
pages = {367--374},
volume = {3},
publisher = {Oxford University Press ({OUP})},
}
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34 changes: 17 additions & 17 deletions README.md
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Expand Up @@ -98,9 +98,9 @@ BetaNB(nb, alpha = 0.05)
#> Standardized regression slopes
#> type = "pc"
#> est se R 2.5% 97.5%
#> NARTIC 0.4951 0.0723 5000 0.3541 0.6358
#> PCTGRT 0.3915 0.0769 5000 0.2381 0.5390
#> PCTSUPP 0.2632 0.0810 5000 0.0992 0.4193
#> NARTIC 0.4951 0.0719 5000 0.3554 0.6426
#> PCTGRT 0.3915 0.0771 5000 0.2355 0.5403
#> PCTSUPP 0.2632 0.0796 5000 0.1054 0.4154
```

### Other Effect Sizes
Expand All @@ -123,8 +123,8 @@ RSqNB(nb, alpha = 0.05)
#> R-squared and adjusted R-squared
#> type = "pc"
#> est se R 2.5% 97.5%
#> rsq 0.8045 0.0516 5000 0.6956 0.8969
#> adj 0.7906 0.0552 5000 0.6739 0.8895
#> rsq 0.8045 0.0520 5000 0.6971 0.8963
#> adj 0.7906 0.0557 5000 0.6755 0.8889
```

#### Improvement in R-squared
Expand All @@ -137,9 +137,9 @@ DeltaRSqNB(nb, alpha = 0.05)
#> Improvement in R-squared
#> type = "pc"
#> est se R 2.5% 97.5%
#> NARTIC 0.1859 0.0594 5000 0.0807 0.3134
#> PCTGRT 0.1177 0.0488 5000 0.0364 0.2232
#> PCTSUPP 0.0569 0.0349 5000 0.0078 0.1395
#> NARTIC 0.1859 0.0602 5000 0.0846 0.3218
#> PCTGRT 0.1177 0.0494 5000 0.0353 0.2275
#> PCTSUPP 0.0569 0.0340 5000 0.0085 0.1397
```

#### Semipartial Correlation Coefficients
Expand All @@ -152,9 +152,9 @@ SCorNB(nb, alpha = 0.05)
#> Semipartial correlations
#> type = "pc"
#> est se R 2.5% 97.5%
#> NARTIC 0.4312 0.0697 5000 0.2841 0.5598
#> PCTGRT 0.3430 0.0729 5000 0.1908 0.4724
#> PCTSUPP 0.2385 0.0728 5000 0.0884 0.3735
#> NARTIC 0.4312 0.0699 5000 0.2908 0.5673
#> PCTGRT 0.3430 0.0734 5000 0.1880 0.4770
#> PCTSUPP 0.2385 0.0715 5000 0.0924 0.3737
```

#### Squared Partial Correlation Coefficients
Expand All @@ -167,9 +167,9 @@ PCorNB(nb, alpha = 0.05)
#> Squared partial correlations
#> type = "pc"
#> est se R 2.5% 97.5%
#> NARTIC 0.4874 0.0976 5000 0.2880 0.6677
#> PCTGRT 0.3757 0.1085 5000 0.1624 0.5827
#> PCTSUPP 0.2254 0.1154 5000 0.0378 0.4809
#> NARTIC 0.4874 0.0972 5000 0.2921 0.6727
#> PCTGRT 0.3757 0.1084 5000 0.1589 0.5842
#> PCTSUPP 0.2254 0.1155 5000 0.0405 0.4810
```

#### Differences of Standardized Regression Coefficients
Expand All @@ -182,9 +182,9 @@ DiffBetaNB(nb, alpha = 0.05)
#> Differences of standardized regression slopes
#> type = "pc"
#> est se R 2.5% 97.5%
#> NARTIC-PCTGRT 0.1037 0.1309 5000 -0.1500 0.3665
#> NARTIC-PCTSUPP 0.2319 0.1263 5000 -0.0116 0.4825
#> PCTGRT-PCTSUPP 0.1282 0.1288 5000 -0.1170 0.3867
#> NARTIC-PCTGRT 0.1037 0.1316 5000 -0.1474 0.3723
#> NARTIC-PCTSUPP 0.2319 0.1234 5000 -0.0004 0.4884
#> PCTGRT-PCTSUPP 0.1282 0.1282 5000 -0.1182 0.3861
```

## Documentation
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