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Constructing Neoantigen Vaccine Pipeline with pVACtools

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Cancer-Vaccine-Pipeline

Reference Sequence File : ucsc.hg38.fa.gz
Patient's Normal WES, Tumor WES, Tumor RNA
Fastq File -> Annotated VCF File 메뉴얼 작성
pVACtools 예제 데이터를 이용하여 Neoantigen Candidate List 추출하는 Pipeline 구축

1차목표 : Cancer Immunotherapy와 Cancer Vaccine 이해
2차목표 : Input Data 준비, pVACtools 학습
최종목표 : 암 환자의 Fastq File 가공, pVACtools 이용해 Neoantigen Candidate List 추출

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Constructing Neoantigen Vaccine Pipeline with pVACtools

rna-sequencing whole-exome-sequencing pvac-seq cancer-immunotherapy

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