From 1792cd933c9ae457b0ad2b8c166234eaff870819 Mon Sep 17 00:00:00 2001 From: jfgrimm Date: Mon, 20 May 2024 15:25:30 +0100 Subject: [PATCH] use PyHMMER easyconfig dependency instead of extension --- .../RELION-5.0.0_beta.2024.05.03-foss-2023a-CUDA-12.1.1.eb | 6 +----- 1 file changed, 1 insertion(+), 5 deletions(-) diff --git a/easybuild/easyconfigs/r/RELION/RELION-5.0.0_beta.2024.05.03-foss-2023a-CUDA-12.1.1.eb b/easybuild/easyconfigs/r/RELION/RELION-5.0.0_beta.2024.05.03-foss-2023a-CUDA-12.1.1.eb index b638f4fb1d24..5ce227e3c10c 100644 --- a/easybuild/easyconfigs/r/RELION/RELION-5.0.0_beta.2024.05.03-foss-2023a-CUDA-12.1.1.eb +++ b/easybuild/easyconfigs/r/RELION/RELION-5.0.0_beta.2024.05.03-foss-2023a-CUDA-12.1.1.eb @@ -115,6 +115,7 @@ dependencies = [ ('imageio', '2.33.1'), ('napari', '0.4.19.post1'), ('tensorboard', '2.15.1'), + ('PyHMMER', '0.10.6'), ] # set this to the path to the Blush model weight database @@ -148,11 +149,6 @@ exts_default_options = { } exts_list = [ - ('pyhmmer', '0.10.4', { - # Cython error when building from source, use wheel for now - 'source_tmpl': '%(name)s-%(version)s-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl', - 'checksums': ['b563272fd46bf25b43c0d4c4ed5accac48a26ee8ca099b942e07ca7b7727a20d'], - }), # starfile 0.5.4 needs pandas>=2.1.1 ('pandas', '2.1.4', { 'checksums': ['fcb68203c833cc735321512e13861358079a96c174a61f5116a1de89c58c0ef7'],