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code cleanup
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version bump
-export code needed in other modules
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jiajic committed Nov 9, 2023
1 parent c2e4bec commit 005aaf5
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Showing 7 changed files with 11 additions and 11 deletions.
2 changes: 1 addition & 1 deletion DESCRIPTION
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@@ -1,6 +1,6 @@
Package: GiottoVisuals
Title: Visuals for the Giotto spatial biology analysis ecosystem
Version: 0.0.0.9005
Version: 0.0.0.9006
Authors@R: c(
person("Ruben", "Dries", email = "rubendries@gmail.com",
role = c("aut", "cre")),
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4 changes: 4 additions & 0 deletions NAMESPACE
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Expand Up @@ -34,6 +34,10 @@ export(plotUMAP)
export(plotUMAP_2D)
export(plotUMAP_3D)
export(plot_output_handler)
export(plotly_axis_scale_2D)
export(plotly_axis_scale_3D)
export(plotly_grid)
export(plotly_network)
export(sankeyLabel)
export(sankeySet)
export(sankeySetAddresses)
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10 changes: 5 additions & 5 deletions R/aux_visuals.R
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Expand Up @@ -196,8 +196,8 @@ mid_rescaler <- function(mid) {
#' @param y_end default to "sdimy_end"
#' @param z_end default to "sdimz_end"
#'
#' @return edges in network as data.table()
#' @keywords internal
#' @return edges in network as data.table
#' @export
plotly_network <- function(network,
x = "sdimx_begin",
y = "sdimy_begin",
Expand Down Expand Up @@ -238,7 +238,7 @@ plotly_network <- function(network,
#' @param spatial_grid spatial_grid in giotto object
#'
#' @return edges in spatial grid as data.table()
#' @keywords internal
#' @export
plotly_grid <- function(spatial_grid,
x_start = "x_start",
y_start = "y_start",
Expand Down Expand Up @@ -281,7 +281,7 @@ plotly_grid <- function(spatial_grid,
#' @param mode axis adjustment mode
#' @param custom_ratio set the ratio artificially
#' @return edges in spatial grid as data.table()
#' @keywords internal
#' @export
plotly_axis_scale_3D <- function(cell_locations,
sdimx = NULL,
sdimy = NULL,
Expand Down Expand Up @@ -328,7 +328,7 @@ plotly_axis_scale_3D <- function(cell_locations,
#' @param mode axis adjustment mode
#' @param custom_ratio set the ratio artificially
#' @return edges in spatial grid as data.table()
#' @keywords internal
#' @export
plotly_axis_scale_2D <- function(cell_locations,
sdimx = NULL,
sdimy = NULL,
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1 change: 0 additions & 1 deletion man/plotly_axis_scale_2D.Rd

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1 change: 0 additions & 1 deletion man/plotly_axis_scale_3D.Rd

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1 change: 0 additions & 1 deletion man/plotly_grid.Rd

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3 changes: 1 addition & 2 deletions man/plotly_network.Rd

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