{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":320393065,"defaultBranch":"main","name":"InfluenzaNanopore","ownerLogin":"jimmyliu1326","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2020-12-10T21:21:34.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/55001263?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1643669132.9055202","currentOid":""},"activityList":{"items":[{"before":"5bf07cb554c6f5b966a4f7151311855849e5bb4f","after":"d7aad42c8cd84a8c1fff3b52c98ba171f67b8170","ref":"refs/heads/main","pushedAt":"2024-01-05T23:28:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"point medaka to model path in container","shortMessageHtmlLink":"point medaka to model path in container"}},{"before":"602612ae3903c3973ac8b6dceb856af348854a3e","after":"5bf07cb554c6f5b966a4f7151311855849e5bb4f","ref":"refs/heads/main","pushedAt":"2023-12-18T08:42:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"predownload medaka models","shortMessageHtmlLink":"predownload medaka models"}},{"before":"0970a96a0a19bf50945315a499276d0b23f5599a","after":"602612ae3903c3973ac8b6dceb856af348854a3e","ref":"refs/heads/main","pushedAt":"2023-12-18T08:21:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"set cache dir to solve space error","shortMessageHtmlLink":"set cache dir to solve space error"}},{"before":"857964ef3fb7133327f27f41af24f7dc23e3a6a4","after":"0970a96a0a19bf50945315a499276d0b23f5599a","ref":"refs/heads/main","pushedAt":"2023-12-18T07:25:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"update help msg","shortMessageHtmlLink":"update help msg"}},{"before":"c5b9733f40b07e7f5c3ced008050f4e452d2459c","after":"857964ef3fb7133327f27f41af24f7dc23e3a6a4","ref":"refs/heads/main","pushedAt":"2023-12-18T07:24:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"36ea6d724aff60d17abe5b1428d1dedbcbfb27a2","after":"c5b9733f40b07e7f5c3ced008050f4e452d2459c","ref":"refs/heads/main","pushedAt":"2023-12-18T07:21:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"update README","shortMessageHtmlLink":"update README"}},{"before":"5b2fbd157065f1049a1ea3847aebf2eb6b23b96d","after":"36ea6d724aff60d17abe5b1428d1dedbcbfb27a2","ref":"refs/heads/main","pushedAt":"2023-12-18T07:19:50.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"create snakemake cache in container","shortMessageHtmlLink":"create snakemake cache in container"}},{"before":"169401f9cb54deabd0dae52326195e513f276e63","after":"5b2fbd157065f1049a1ea3847aebf2eb6b23b96d","ref":"refs/heads/main","pushedAt":"2023-12-18T06:32:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"update to medaka v1.11.3","shortMessageHtmlLink":"update to medaka v1.11.3"}},{"before":"0256a85cb9f23f5eedb097577e22b20335d896b1","after":"169401f9cb54deabd0dae52326195e513f276e63","ref":"refs/heads/main","pushedAt":"2023-12-18T06:18:06.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"track list of medaka models","shortMessageHtmlLink":"track list of medaka models"}},{"before":"66db6235bf878aabd883b70c0f9a07cdc83d290a","after":"0256a85cb9f23f5eedb097577e22b20335d896b1","ref":"refs/heads/main","pushedAt":"2023-12-18T05:54:27.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"use exact matching to validate medaka model","shortMessageHtmlLink":"use exact matching to validate medaka model"}},{"before":"09fdc5a0f5cde3568036b5f60bf5295bae9b99e0","after":"66db6235bf878aabd883b70c0f9a07cdc83d290a","ref":"refs/heads/main","pushedAt":"2023-12-18T05:47:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"enable selection of specific medaka models","shortMessageHtmlLink":"enable selection of specific medaka models"}},{"before":"b63f38a9ca8202108b493d6ba2db361489471197","after":"09fdc5a0f5cde3568036b5f60bf5295bae9b99e0","ref":"refs/heads/main","pushedAt":"2023-10-24T03:50:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"use strict channel priority","shortMessageHtmlLink":"use strict channel priority"}},{"before":"df22184d32ecec7560f035373f6bca2c90d68cc4","after":"b63f38a9ca8202108b493d6ba2db361489471197","ref":"refs/heads/main","pushedAt":"2023-10-24T02:58:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"create indep env for medaka","shortMessageHtmlLink":"create indep env for medaka"}},{"before":"795a9d02ced2b29e82519f7a45099c6495b217e3","after":"df22184d32ecec7560f035373f6bca2c90d68cc4","ref":"refs/heads/main","pushedAt":"2023-10-24T02:19:45.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"use existing env for medaka","shortMessageHtmlLink":"use existing env for medaka"}},{"before":"31ead80a567cc1d20cfe82890a7c06d3981f29b1","after":"795a9d02ced2b29e82519f7a45099c6495b217e3","ref":"refs/heads/main","pushedAt":"2023-10-24T01:42:19.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"create an indep env for medaka","shortMessageHtmlLink":"create an indep env for medaka"}},{"before":"e78e6fb1ebbd84b0d208b35156385d3dbbf064c6","after":"31ead80a567cc1d20cfe82890a7c06d3981f29b1","ref":"refs/heads/main","pushedAt":"2023-10-24T00:45:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"update medaka to v1.6.0","shortMessageHtmlLink":"update medaka to v1.6.0"}},{"before":"e0601ae414f78927e3f078fc9063404f659ebe54","after":"e78e6fb1ebbd84b0d208b35156385d3dbbf064c6","ref":"refs/heads/main","pushedAt":"2023-10-11T19:45:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"fixed compress fastq input handling","shortMessageHtmlLink":"fixed compress fastq input handling"}},{"before":"8f7a7d8584d3956453300c8997d80f051b4f79cc","after":"e0601ae414f78927e3f078fc9063404f659ebe54","ref":"refs/heads/main","pushedAt":"2023-07-26T23:10:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"fixed consensus file naming","shortMessageHtmlLink":"fixed consensus file naming"}},{"before":"5257e162ed60206812b9dd96d2b8cc848ef8af3a","after":"8f7a7d8584d3956453300c8997d80f051b4f79cc","ref":"refs/heads/main","pushedAt":"2023-07-26T22:29:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"use local docker build","shortMessageHtmlLink":"use local docker build"}},{"before":"c9b22aef285262f5d1ce87f8aa5e848601d95bb0","after":"5257e162ed60206812b9dd96d2b8cc848ef8af3a","ref":"refs/heads/main","pushedAt":"2023-07-26T22:25:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"Create docker-image.yml","shortMessageHtmlLink":"Create docker-image.yml"}},{"before":"9e05a5edfb4ca472bfca12cae95336a1856d7f4b","after":"c9b22aef285262f5d1ce87f8aa5e848601d95bb0","ref":"refs/heads/main","pushedAt":"2023-07-26T22:19:36.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"fixed the order of segment names","shortMessageHtmlLink":"fixed the order of segment names"}},{"before":"2e17913a1a5e5742bfaa7582f6c83ba74c239e4d","after":"9e05a5edfb4ca472bfca12cae95336a1856d7f4b","ref":"refs/heads/main","pushedAt":"2023-06-28T23:43:47.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"update Dockerfile","shortMessageHtmlLink":"update Dockerfile"}},{"before":"b7364efe6eb4c44ac60aaef7701cf1fa4a22ad8c","after":"2e17913a1a5e5742bfaa7582f6c83ba74c239e4d","ref":"refs/heads/main","pushedAt":"2023-06-28T23:16:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"add spoa","shortMessageHtmlLink":"add spoa"}},{"before":"4987bf7868cac7fe1a845ed545e4bf8e57c36562","after":"b7364efe6eb4c44ac60aaef7701cf1fa4a22ad8c","ref":"refs/heads/main","pushedAt":"2023-06-28T23:04:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"add ggridges","shortMessageHtmlLink":"add ggridges"}},{"before":"cffbfd8088b658c8116823b274dd4e62dace4e3d","after":"4987bf7868cac7fe1a845ed545e4bf8e57c36562","ref":"refs/heads/main","pushedAt":"2023-06-28T22:12:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"update r-base","shortMessageHtmlLink":"update r-base"}},{"before":"1e009371c843185cd9545fb13e6788e8358babab","after":"cffbfd8088b658c8116823b274dd4e62dace4e3d","ref":"refs/heads/main","pushedAt":"2023-06-28T22:02:35.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"add r dependencies","shortMessageHtmlLink":"add r dependencies"}},{"before":"a959b95ec63e6b91df6f4d14011eacec97218daa","after":"1e009371c843185cd9545fb13e6788e8358babab","ref":"refs/heads/main","pushedAt":"2023-06-28T19:08:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"use centrifuge db in docker img by default","shortMessageHtmlLink":"use centrifuge db in docker img by default"}},{"before":"101ed0e1edb454d021d3ac80ddd7ceefb695cdca","after":"a959b95ec63e6b91df6f4d14011eacec97218daa","ref":"refs/heads/main","pushedAt":"2023-06-28T18:57:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"update conda env yml","shortMessageHtmlLink":"update conda env yml"}},{"before":"6c7bf52ebed56501e35780629cff1adfcb031ea7","after":"101ed0e1edb454d021d3ac80ddd7ceefb695cdca","ref":"refs/heads/main","pushedAt":"2023-06-28T17:20:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jimmyliu1326","name":"Jimmy Liu","path":"/jimmyliu1326","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/55001263?s=80&v=4"},"commit":{"message":"add conda env specs","shortMessageHtmlLink":"add conda env specs"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wMS0wNVQyMzoyODoxNi4wMDAwMDBazwAAAAPY9f6B","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wMS0wNVQyMzoyODoxNi4wMDAwMDBazwAAAAPY9f6B","endCursor":"Y3Vyc29yOnYyOpK7MjAyMy0wNi0yOFQxNzoyMDoyNC4wMDAwMDBazwAAAANK8jZt"}},"title":"Activity ยท jimmyliu1326/InfluenzaNanopore"}