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Merge pull request #19 from martenson/nsoranzo-patch-1-1
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Small fixes to conda_faq.rst changes
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martenson authored Oct 3, 2016
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18 changes: 9 additions & 9 deletions doc/source/admin/conda_faq.rst
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Expand Up @@ -66,15 +66,15 @@ graphical user interface that allows administrators install Conda
packages directly from Galaxy when tools are installed from the Tool
Shed is available since the 16.07 version of Galaxy.

During the tool installation admin has control over what system will be used to
install the tool's requirements. The default settings will trigger installation
of both TS package and Conda package (if Conda is present) thus depending on the
dependency resolvers configuration with regards to what will be actually used during
the tool's runtime. See `resolver docs`_ for detailed documentation.

We recommend to use Conda exclusively on tool per tool basis by unchecking the checkbox
for TS dependencies during the tool installation or in cases of tools where there
are no TS dependencies existing anymore.
During a tool installation, the Galaxy admin has control over which systems will be used to
install the tool requirements. The default settings will trigger installation
of both TS and Conda packages (if Conda is present), thus depending on the
dependency resolvers configuration with regards to what will actually be used during
the tool execution. See `resolver docs`_ for detailed documentation.

We recommend to use Conda on a tool-per-tool basis, by unchecking the checkbox
for TS dependencies during the tool installation, and for tools where there
are no available TS dependencies.

The most important configuration settings related to Conda are listed in Table 1.

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