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distributionbag.jl
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distributionbag.jl
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# Library for collections of distribution
#
# 2024 by Ralf Herbrich
# Hasso-Plattner Institute
module DistributionCollections
export DistributionBag, add!, reset!
"""
Data structure that stores a colletion of distributions
"""
struct DistributionBag{T} <: AbstractArray{T, 1}
uniform::T # the uniform distribution of distribution type T
bag::Vector{T} # the actual resizeable vector that stores the 1D Gaussians
# default constructor
DistributionBag{T}(uniform::T) where {T} = new(uniform, Vector{T}(undef, 0))
end
"""
DistributionBag(uniform::T)
Outer constructor for the distribution bag
# Example
```julia-repl
julia> DistributionBag(Discrete(5))
0-element DistributionBag{Discrete{5}}
```
"""
DistributionBag(uniform::T) where {T} = DistributionBag{T}(uniform)
"""
show(io,db::DistributionBag{T})
Pretty-prints a distribution bag
# Example
```julia-repl
julia> DistributionBag(Discrete(5))
0-element DistributionBag{Discrete{5}}
julia> print(db)
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
empty bag
julia> add!(db)
1
julia> print(db)
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[1]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
```
"""
function Base.show(io::IO, db::DistributionBag{T}) where {T}
println(io, "Uniform: ", db.uniform)
if (length(db.bag) == 0)
println(io, " empty bag")
else
for i in eachindex(db.bag)
println(io, " [", i, "]: ", db.bag[i])
end
end
end
"""
add(db::DistributionBag{T})
Adds a new distribution to the distribution bag `db` and returns a unique index
# Example
```julia-repl
julia> db = DistributionBag(Discrete(5))
0-element DistributionBag{Discrete{5}}
julia> add!(db)
1
julia> db
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[1]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
```
"""
function add!(db::DistributionBag{T}) where {T}
push!(db.bag, db.uniform)
return (length(db.bag))
end
"""
reset!(db::DistributionBag{T})
Resets all distribution to the uniform in the distribution bag `db`
# Example
```julia-repl
julia> db = DistributionBag(Discrete(5))
0-element DistributionBag{Discrete{5}}
julia> add!(db)
1
julia> db
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[1]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
julia> db[1] = Discrete([0.0, 1.0, 1.0, 2.0, -1.0])
P = [0.0704547896272078, 0.19151597437154377, 0.19151597437154377, 0.5205943929937957, 0.025918868635908737]
julia> db
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[1]: P = [0.0704547896272078, 0.19151597437154377, 0.19151597437154377, 0.5205943929937957, 0.025918868635908737]
julia> reset!(db)
julia> db
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[1]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
```
"""
function reset!(db::DistributionBag{T}) where {T}
for i in eachindex(db.bag)
db.bag[i] = db.uniform
end
return
end
"""
getindex(db::DistributionBag{T}, i::Int64)
Retrieves the distribution at index `i` from the distribution bag `db`
# Example
```julia-repl
julia> db = DistributionBag(Discrete(5))
0-element DistributionBag{Discrete{5}}
julia> add!(db)
1
julia> db
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[1]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
julia> db[1]
P = [0.2, 0.2, 0.2, 0.2, 0.2]
```
"""
Base.getindex(db::DistributionBag{T}, i::Int64) where {T} = db.bag[i]
"""
setindex(db::DistributionBag{T},d::T,i::Int64)
Sets the 1D Gaussian at index `i` in the distribution bag `db` to `d`
# Example
```julia-repl
julia> db = DistributionBag(Discrete(5))
0-element DistributionBag{Discrete{5}}
julia> add!(db)
1
julia> db
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[1]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
julia> db[1] = Discrete([0.0, 1.0, 1.0, 2.0, -1.0])
P = [0.0704547896272078, 0.19151597437154377, 0.19151597437154377, 0.5205943929937957, 0.025918868635908737]
julia> db
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[1]: P = [0.0704547896272078, 0.19151597437154377, 0.19151597437154377, 0.5205943929937957, 0.025918868635908737]
```
"""
function Base.setindex!(db::DistributionBag{T}, d::T, i::Int64) where {T}
db.bag[i] = d
end
"""
firstindex(db::DistributionBag{T})
Retrieves the index of the first element of the distribution bag
# Example
```julia-repl
julia> db = DistributionBag(Discrete(5))
0-element DistributionBag{Discrete{5}}
julia> add!(db)
1
julia> add!(db)
2
julia> db
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[1]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[2]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
julia> db[1] = Discrete([0.0, 1.0, 1.0, 2.0, -1.0])
P = [0.0704547896272078, 0.19151597437154377, 0.19151597437154377, 0.5205943929937957, 0.025918868635908737]
julia> db
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[1]: P = [0.0704547896272078, 0.19151597437154377, 0.19151597437154377, 0.5205943929937957, 0.025918868635908737]
[2]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
julia> db[begin]
P = [0.0704547896272078, 0.19151597437154377, 0.19151597437154377, 0.5205943929937957, 0.025918868635908737]
```
"""
Base.firstindex(db::DistributionBag{T}) where {T} = return (1)
"""
lastindex(db::DistributionBag{T})
Retrieves the index of the last element of the distribution bag
# Example
```julia-repl
julia> db = DistributionBag(Discrete(5))
0-element DistributionBag{Discrete{5}}
julia> add!(db)
1
julia> add!(db)
2
julia> db
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[1]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[2]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
julia> db[1] = Discrete([0.0, 1.0, 1.0, 2.0, -1.0])
P = [0.0704547896272078, 0.19151597437154377, 0.19151597437154377, 0.5205943929937957, 0.025918868635908737]
julia> db
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[1]: P = [0.0704547896272078, 0.19151597437154377, 0.19151597437154377, 0.5205943929937957, 0.025918868635908737]
[2]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
julia> db[end]
P = [0.2, 0.2, 0.2, 0.2, 0.2]
```
"""
Base.lastindex(db::DistributionBag{T}) where {T} = return (length(db.bag))
"""
size(db::DistributionBag{T})
Returns the size of the distribution bag
# Example
```julia-repl
julia> db = DistributionBag(Discrete(5))
0-element DistributionBag{Discrete{5}}
julia> add!(db)
1
julia> add!(db)
2
julia> size(db)
(2,)
```
"""
Base.size(db::DistributionBag{T}) where {T} = (length(db.bag),)
"""
IndexStyle(db::DistributionBag{T})
Returns the indexing style that can be used for a distribuion bag
"""
Base.IndexStyle(::Type{<:DistributionBag{T}}) where {T} = IndexLinear()
"""
eltype(db::DistributionBag{T})
Returns the element type (i.e., the distribution type) of the distribution bag
# Example
```julia-repl
julia> db = DistributionBag(Discrete(5))
0-element DistributionBag{Discrete{5}}
julia> eltype(db)
Discrete{5}
```
"""
Base.eltype(::Type{<:DistributionBag{T}}) where {T} = T
"""
iterate(db::DistributionBag, i=1)
Implements an iterator so a distribution bag can be used like an enumerable
# Example
```julia-repl
julia> db = DistributionBag(Discrete(5))
0-element DistributionBag{Discrete{5}}
julia> add!(db)
1
julia> add!(db)
2
julia> db
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[1]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[2]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
julia> db[1] = Discrete([0.0, 1.0, 1.0, 2.0, -1.0])
P = [0.0704547896272078, 0.19151597437154377, 0.19151597437154377, 0.5205943929937957, 0.025918868635908737]
julia> db
Uniform: P = [0.2, 0.2, 0.2, 0.2, 0.2]
[1]: P = [0.0704547896272078, 0.19151597437154377, 0.19151597437154377, 0.5205943929937957, 0.025918868635908737]
[2]: P = [0.2, 0.2, 0.2, 0.2, 0.2]
julia> for d in db
println(d)
end
P = [0.0704547896272078, 0.19151597437154377, 0.19151597437154377, 0.5205943929937957, 0.025918868635908737]
P = [0.2, 0.2, 0.2, 0.2, 0.2]
```
"""
Base.iterate(db::DistributionBag{T}, i=1) where {T} = (i > length(db.bag)) ? nothing : (db.bag[i], i+1)
end