Make test dependent on limma version

jpquast · Nov 2, 2024 · 75ba857 · 75ba857
1 parent 047b711
commit 75ba857
Showing 1 changed file with 6 additions and 1 deletion.
diff --git a/tests/testthat/test-workflow.R b/tests/testthat/test-workflow.R
@@ -326,8 +326,13 @@ test_that("calculate_diff_abundance works", {
     expect_equal(ncol(diff_moderated), 13)
     expect_equal(ncol(diff_proDA), 12)
     expect_equal(round(min(diff_mean_sd$adj_pval, na.rm = TRUE), digits = 9), 0.00758761)
-    expect_equal(round(min(diff_moderated$adj_pval, na.rm = TRUE), digits = 9), 3.87e-05)
     expect_equal(round(min(diff_proDA$adj_pval, na.rm = TRUE), digits = 5), 0.00125)
+
+    if (packageVersion("limma") < "3.61.8") {
+      expect_equal(round(min(diff_moderated$adj_pval, na.rm = TRUE), digits = 9), 3.87e-05)
+    } else {
+      expect_equal(round(min(diff_moderated$adj_pval, na.rm = TRUE), digits = 9), 5.76e-05)
+    }
   }
 })