v0.6.4

Picasso 0.6.4 is here.

Changelog

• Fix RCC error in one click installer (in versions 0.6.1-3)
• Picasso runs on Python 3.10 (jump from Python 3.7-3.8)
• New installation instructions
• Dependencies updated, meaning that M1 should have no problems with old versions of SciPy, etc.
• Localize: arbitrary number of sensitivity categories
• Picasso Render legend displays larger font
• Picasso Render Test Clusterer displays info when no clusters found instead of throwing an error
• Calling clustering functions from picasso.clusterer does not require camera pixel size. Same applies for the corresponding functions in CMD. Only if 3D localizations are used, the pixel size must be provided.
• HDBSCAN is installed by default since it is distributed within the new version of scikit-learn 1.3.0
• Screenshot .yaml file contains the list of colors used in the current rendering
• Render scale bar allows only integer values (i.e., no decimals)
• Localize .ims file fitting bug solve
• Measuring in 3D render window (Measure tool and scalebar) fixed (previous versions showed incorrect values)
• Localize GUI allows for numerical ROI input (Parameters dialog)
• Export current view in Render saves metadata; an extra image is saved with a scalebar
• Allow loading individual .tif files (same as prior to v0.4.11)
• Clustering using CMD requires the user to input camera pixel size (instead of asking for the input after the function call)
• RESI localizations have new column 'cluster_id'
• Bug fixes

Notes

⚠️ Windows Safety features and Windows Defender will ask multiple times for permission during the installation and download.
⚠️ If you experience problems starting Picasso, start as Administrator.