.gitignore

#--------------
# Generic stuff
#--------------
*.cache
*.Debug
*.o
*.orig
*.out
*.Release
*~
._*
.\#*
*.bak
*.DS_Store
*._*
*.directory
*-eps-converted-to.pdf
*.Rhistory
Thumbs.db

#------------------------------------
# Aced install directory & other build dirs
#------------------------------------
Makefile
Testing/
installed/
install_manifest.txt
main/Makefile
main/**/Makefile
main/cpp/stride
main/python/pystride/stride
main/python/stride.py
main/resources/data_zip
test/**/Makefile
test/cpp/btester/btester
test/cpp/gtester/gtester

#------------------------------------
# Local make config & build directory
#------------------------------------
/.cproject
/.project
/MakeLocalConfig
/.settings/
target*/
build*/
#/CMakeLocal.cmake
/CMakeLocalProject.cmake

#-----------------------------
# Covers JetBrains IDEs: IntelliJ, RubyMine, PhpStorm, AppCode, PyCharm, CLion, Android Studio and Webstorm
# Reference: https://intellij-support.jetbrains.com/hc/en-us/articles/206544839
#-----------------------------
# User-specific stuff:
#.idea/**/workspace.xml
#.idea/**/tasks.xml
#.idea/dictionaries

# Sensitive or high-churn files:
#.idea/**/dataSources/
#.idea/**/dataSources.ids
#.idea/**/dataSources.xml
#.idea/**/dataSources.local.xml
#.idea/**/sqlDataSources.xml
#.idea/**/dynamic.xml
#.idea/**/uiDesigner.xml

# alle project definition & config files
.idea/**
# CMake
cmake-build-*
## File-based project format:
*.iws

#------------------------------------
# Latex stuff
#------------------------------------
/src/doc/latex_user_man/UserManual.aux
/src/doc/latex_user_man/UserManual.bbl
/src/doc/latex_user_man/UserManual.blg
/src/doc/latex_user_man/UserManual.out
/src/doc/latex_user_man/UserManual.synctex.gz
/src/doc/latex_user_man/UserManual.toc

#------------------------------------
# Python stuff
#------------------------------------
.pydevproject

#----------------
# LaTeX build stuff
#----------------
*.synctex.gz
*.log
*.aux

#----------------
# CMake-generated stuff
#----------------
CMakeFiles/
CMakeCache.txt
cmake_install.cmake
CTestTestfile.cmake
run_cmake.sh
CPackConfig.cmake
CPackSourceConfig.cmake
*.[oa]

#----------------
# Doxygen stuff
#----------------
doc/doxygen/Doxyfile
#doc/doxygen/html
doc/doxygen/latex
doc/doxygen/tex

#----------------
# generated by gitignore.io
#----------------

### C++ ###
# Prerequisites
*.d

# Compiled Object files
*.slo
*.lo
*.o
*.obj

# Precompiled Headers
*.gch
*.pch

# Compiled Dynamic libraries
*.so
*.dylib
*.dll

# Fortran module files
*.mod
*.smod

# Compiled Static libraries
*.lai
*.la
*.a
*.lib

# Executables
*.exe
*.out
*.app

### CLion ###
# Covers JetBrains IDEs: IntelliJ, RubyMine, PhpStorm, AppCode, PyCharm, CLion, Android Studio and WebStorm
# Reference: https://intellij-support.jetbrains.com/hc/en-us/articles/206544839

# User-specific stuff
.idea/**/workspace.xml
.idea/**/tasks.xml
.idea/**/usage.statistics.xml
.idea/**/dictionaries
.idea/**/shelf

# Generated files
.idea/**/contentModel.xml

# Sensitive or high-churn files
.idea/**/dataSources/
.idea/**/dataSources.ids
.idea/**/dataSources.local.xml
.idea/**/sqlDataSources.xml
.idea/**/dynamic.xml
.idea/**/uiDesigner.xml
.idea/**/dbnavigator.xml

# Gradle
.idea/**/gradle.xml
.idea/**/libraries

# Gradle and Maven with auto-import
# When using Gradle or Maven with auto-import, you should exclude module files,
# since they will be recreated, and may cause churn.  Uncomment if using
# auto-import.
# .idea/modules.xml
# .idea/*.iml
# .idea/modules

# CMake
cmake-build-*/

# Mongo Explorer plugin
.idea/**/mongoSettings.xml

# File-based project format
*.iws

# IntelliJ
out/

# mpeltonen/sbt-idea plugin
.idea_modules/

# JIRA plugin
atlassian-ide-plugin.xml

# Cursive Clojure plugin
.idea/replstate.xml

# Crashlytics plugin (for Android Studio and IntelliJ)
com_crashlytics_export_strings.xml
crashlytics.properties
crashlytics-build.properties
fabric.properties

# Editor-based Rest Client
.idea/httpRequests

# Android studio 3.1+ serialized cache file
.idea/caches/build_file_checksums.ser

### CLion Patch ###
# Comment Reason: https://github.com/joeblau/gitignore.io/issues/186#issuecomment-215987721

# *.iml
# modules.xml
# .idea/misc.xml
# *.ipr

# Sonarlint plugin
.idea/sonarlint

### Eclipse ###

.metadata
tmp/
*.tmp
*.bak
*.swp
*~.nib
local.properties
.settings/
.loadpath
.recommenders

# External tool builders
.externalToolBuilders/

# Locally stored "Eclipse launch configurations"
*.launch

# PyDev specific (Python IDE for Eclipse)
*.pydevproject

# CDT-specific (C/C++ Development Tooling)
.cproject

# CDT- autotools
.autotools

# Java annotation processor (APT)
.factorypath

# PDT-specific (PHP Development Tools)
.buildpath

# sbteclipse plugin
.target

# Tern plugin
.tern-project

# TeXlipse plugin
.texlipse

# STS (Spring Tool Suite)
.springBeans

# Code Recommenders
.recommenders/

# Annotation Processing
.apt_generated/

# Scala IDE specific (Scala & Java development for Eclipse)
.cache-main
.scala_dependencies
.worksheet

### Eclipse Patch ###
# Eclipse Core
.project

# JDT-specific (Eclipse Java Development Tools)
.classpath

# Annotation Processing
.apt_generated

.sts4-cache/

### Linux ###
*~

# temporary files which can be created if a process still has a handle open of a deleted file
.fuse_hidden*

# KDE directory preferences
.directory

# Linux trash folder which might appear on any partition or disk
.Trash-*

# .nfs files are created when an open file is removed but is still being accessed
.nfs*

### macOS ###
# General
.DS_Store
.AppleDouble
.LSOverride

# Icon must end with two \r
Icon

# Thumbnails
._*

# Files that might appear in the root of a volume
.DocumentRevisions-V100
.fseventsd
.Spotlight-V100
.TemporaryItems
.Trashes
.VolumeIcon.icns
.com.apple.timemachine.donotpresent

# Directories potentially created on remote AFP share
.AppleDB
.AppleDesktop
Network Trash Folder
Temporary Items
.apdisk

### Python ###
# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class

# C extensions

# Distribution / packaging
.Python
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib64/
parts/
sdist/
var/
wheels/
pip-wheel-metadata/
share/python-wheels/
*.egg-info/
.installed.cfg
*.egg
MANIFEST

# PyInstaller
#  Usually these files are written by a python script from a template
#  before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec

# Installer logs
pip-log.txt
pip-delete-this-directory.txt

# Unit test / coverage reports
htmlcov/
.tox/
.nox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*.cover
.hypothesis/
.pytest_cache/

# Translations
*.mo
*.pot

# Django stuff:
*.log
local_settings.py
db.sqlite3

# Flask stuff:
instance/
.webassets-cache

# Scrapy stuff:
.scrapy

# Sphinx documentation
docs/_build/

# PyBuilder
target/

# Jupyter Notebook
.ipynb_checkpoints

# IPython
profile_default/
ipython_config.py

# pyenv
.python-version

# celery beat schedule file
celerybeat-schedule

# SageMath parsed files
*.sage.py

# Environments
.env
.venv
env/
venv/
ENV/
env.bak/
venv.bak/

# Spyder project settings
.spyderproject
.spyproject

# Rope project settings
.ropeproject

# mkdocs documentation
/site

# mypy
.mypy_cache/
.dmypy.json
dmypy.json

# Pyre type checker
.pyre/

### Python Patch ###
.venv/

### R ###
# History files
.Rhistory
.Rapp.history

# Session Data files
.RData

# Example code in package build process
*-Ex.R

# Output files from R CMD build
/*.tar.gz

# Output files from R CMD check
/*.Rcheck/

# RStudio files
.Rproj.user/

# produced vignettes
vignettes/*.html
vignettes/*.pdf

# OAuth2 token, see https://github.com/hadley/httr/releases/tag/v0.3
.httr-oauth

# knitr and R markdown default cache directories
/*_cache/
/cache/

# Temporary files created by R markdown
*.utf8.md
*.knit.md

### R.Bookdown Stack ###
# R package: bookdown caching files
/*_files/

### vscode
**/.vscode

installation_dir/*

### HDF5

main/resources/lib/hdf5/src/H5Edefin.h
main/resources/lib/hdf5/src/H5Einit.h
main/resources/lib/hdf5/src/H5Epubgen.h
main/resources/lib/hdf5/src/H5Eterm.h