Update Dockstore.cwl

Dockstore.cwl

@@ -1,67 +1,24 @@
-#
-# This is a not quite so funked out workflow
-#
+cwlVersion: v1.0
 class: Workflow
-description: "Reverse the lines in a document, then sort those lines."
-cwlVersion: cwl:draft-3
-
-# Requirements & hints specify prerequisites and extensions to the workflow.
-# In this example, DockerRequirement specifies a default Docker container
-# in which the command line tools will execute.
-hints:
-  - class: DockerRequirement
-    dockerPull: debian:8
-
-
-# The inputs array defines the structure of the input object that describes
-# the inputs to the workflow.
-#
-# The "reverse_sort" input parameter demonstrates the "default" field.  If the
-# field "reverse_sort" is not provided in the input object, the default value will
-# be used.
 inputs:
-  - id: input
-    type: File
-    description: "The input file to be processed."
-  - id: reverse_sort
-    type: boolean
-    default: true
-    description: "If true, reverse (decending) sort"
+  inp: File
+  ex: string
 
-# The "outputs" array defines the structure of the output object that describes
-# the outputs of the workflow.
-#
-# Each output field must be connected to the output of one of the workflow
-# steps using the "connect" field.  Here, the parameter "#output" of the
-# workflow comes from the "#sorted" output of the "sort" step.
 outputs:
-  - id: output
+  classout:
     type: File
-    source: "#sorted/output"
-    description: "The output with the lines reversed and sorted."
+    outputSource: compile/classfile
 
-# The "steps" array lists the executable steps that make up the workflow.
-# The tool to execute each step is listed in the "run" field.
-#
-# In the first step, the "inputs" field of the step connects the upstream
-# parameter "#input" of the workflow to the input parameter of the tool
-# "revtool.cwl#input"
-#
-# In the second step, the "inputs" field of the step connects the output
-# parameter "#reversed" from the first step to the input parameter of the
-# tool "sorttool.cwl#input".
 steps:
-  - id: rev
-    inputs:
-      - { id: input, source: "#input" }
-    outputs:
-      - { id: output }
-    run: revtool.cwl
+  untar:
+    run: tar-param.cwl
+    in:
+      tarfile: inp
+      extractfile: ex
+    out: [example_out]
 
-  - id: sorted
-    inputs:
-      - { id: input, source: "#rev/output" }
-      - { id: reverse, source: "#reverse_sort" }
-    outputs:
-      - { id: output }
-    run: sorttool.cwl
+  compile:
+    run: arguments.cwl
+    in:
+      src: untar/example_out
+    out: [classfile]