Modified importing curation package with absolute path.

kevon217 · Mar 8, 2023 · a49cb63 · a49cb63
1 parent 3970184
commit a49cb63
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Showing 4 changed files with 3 additions and 4 deletions.
diff --git a/data_dictionary_cui_mapping/curation/check_cuis.py b/data_dictionary_cui_mapping/curation/check_cuis.py
@@ -8,7 +8,6 @@
 from prefect import flow
 import pandas as pd
 import numpy as np
-from curation.utils import curation_functions as cur
 from data_dictionary_cui_mapping.utils import helper as helper
 from data_dictionary_cui_mapping.curation.utils import dictionary_functions as dictfn
 

diff --git a/data_dictionary_cui_mapping/curation/create_dictionary_import_file.py b/data_dictionary_cui_mapping/curation/create_dictionary_import_file.py
@@ -8,7 +8,7 @@
 
 from prefect import flow
 
-from curation.utils import curation_functions as cur
+from data_dictionary_cui_mapping.curation.utils import curation_functions as cur
 from data_dictionary_cui_mapping.utils import helper as helper
 
 

diff --git a/data_dictionary_cui_mapping/metamap/batch_query_pipeline.py b/data_dictionary_cui_mapping/metamap/batch_query_pipeline.py
@@ -15,7 +15,7 @@
     metamap_query_processing_functions as mm_qproc,
 )
 from data_dictionary_cui_mapping.metamap.utils.api_connection import check_credentials
-from curation.utils import curation_functions as cur
+from data_dictionary_cui_mapping.curation.utils import curation_functions as cur
 
 cfg = helper.compose_config.fn(
     config_path="../configs",

diff --git a/data_dictionary_cui_mapping/umls/batch_query_pipeline.py b/data_dictionary_cui_mapping/umls/batch_query_pipeline.py
@@ -9,7 +9,7 @@
 import pandas as pd
 from prefect import flow
 
-import curation.utils.curation_functions as cur
+import data_dictionary_cui_mapping.curation.utils.curation_functions as cur
 import data_dictionary_cui_mapping.utils.helper as helper
 import data_dictionary_cui_mapping.utils.process_data_dictionary as proc_dd
 from data_dictionary_cui_mapping.umls.utils.api_connection import (