From c4db1574bc681516772f6b8f3354d1e0a566fccf Mon Sep 17 00:00:00 2001 From: Miguel Brown Date: Wed, 10 Jan 2024 09:32:25 -0500 Subject: [PATCH] :hammer: updated mioncoseq to pull from more studies :pencil: corrected a rampant typo --- .../openPBTA/openpbta_case_meta_config.json | 4 ++-- .../openTARGETS/case_openTargets_meta_config.json | 4 ++-- .../openpedcan_v11_case_meta_config.json | 4 ++-- .../openpedcan_v12_case_meta_config.json | 4 ++-- .../case_Ijaz_cole_published_meta_config.json | 4 ++-- .../case_cptac_published_meta_config.json | 4 ++-- .../aml_sd_z6mwd3h0_2018_case_meta_config.json | 4 ++-- STUDY_CONFIGS/case_cptac_meta_config.json | 4 ++-- .../chdm_phs001643_2018_case_meta_config.json | 4 ++-- .../chdm_phs002301_2021_case_meta_config.json | 2 +- .../chdm_sd_7spqtt8m_case_meta_config.json | 4 ++-- STUDY_CONFIGS/oligo_nation_case_meta_config.json | 4 ++-- STUDY_CONFIGS/open_chordoma_case_meta_config.json | 4 ++-- .../os_sd_zxjffmef_2015_case_meta_config.json | 4 ++-- STUDY_CONFIGS/pbta_all_case_meta_config.json | 4 ++-- STUDY_CONFIGS/pbta_all_treatment_meta_config.json | 4 ++-- STUDY_CONFIGS/pbta_mioncoseq_case_meta_config.json | 14 ++++++++++++-- .../tll_sd_aq9kvn5p_2019_case_meta_config.json | 4 ++-- .../x01_nbl_16_maris_case_meta_config.json | 4 ++-- 19 files changed, 47 insertions(+), 37 deletions(-) diff --git a/COLLABORATIONS/openPBTA/openpbta_case_meta_config.json b/COLLABORATIONS/openPBTA/openpbta_case_meta_config.json index 12f9b97..beb0a54 100644 --- a/COLLABORATIONS/openPBTA/openpbta_case_meta_config.json +++ b/COLLABORATIONS/openPBTA/openpbta_case_meta_config.json @@ -122,7 +122,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor samples with mutation, CNA and mRNA data", "case_list_description": "All tumor samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -134,7 +134,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/COLLABORATIONS/openTARGETS/case_openTargets_meta_config.json b/COLLABORATIONS/openTARGETS/case_openTargets_meta_config.json index 6f891c6..9606512 100644 --- a/COLLABORATIONS/openTARGETS/case_openTargets_meta_config.json +++ b/COLLABORATIONS/openTARGETS/case_openTargets_meta_config.json @@ -125,7 +125,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor samples with mutation, CNA and mRNA data", "case_list_description": "All tumor samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -137,7 +137,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/COLLABORATIONS/openTARGETS/openpedcan_v11_case_meta_config.json b/COLLABORATIONS/openTARGETS/openpedcan_v11_case_meta_config.json index 34593f3..c06c560 100644 --- a/COLLABORATIONS/openTARGETS/openpedcan_v11_case_meta_config.json +++ b/COLLABORATIONS/openTARGETS/openpedcan_v11_case_meta_config.json @@ -135,7 +135,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor samples with mutation, CNA and mRNA data", "case_list_description": "All tumor samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -147,7 +147,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/COLLABORATIONS/openTARGETS/openpedcan_v12_case_meta_config.json b/COLLABORATIONS/openTARGETS/openpedcan_v12_case_meta_config.json index 2edad36..b79bb73 100644 --- a/COLLABORATIONS/openTARGETS/openpedcan_v12_case_meta_config.json +++ b/COLLABORATIONS/openTARGETS/openpedcan_v12_case_meta_config.json @@ -126,7 +126,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor samples with mutation, CNA and mRNA data", "case_list_description": "All tumor samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -138,7 +138,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/PUBLICATIONS/Ijaz_cole/case_Ijaz_cole_published_meta_config.json b/PUBLICATIONS/Ijaz_cole/case_Ijaz_cole_published_meta_config.json index b02a102..5bd4fd4 100644 --- a/PUBLICATIONS/Ijaz_cole/case_Ijaz_cole_published_meta_config.json +++ b/PUBLICATIONS/Ijaz_cole/case_Ijaz_cole_published_meta_config.json @@ -107,7 +107,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor samples with mutation, CNA and mRNA data", "case_list_description": "All tumor samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -120,7 +120,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/PUBLICATIONS/cptac_proteomics/case_cptac_published_meta_config.json b/PUBLICATIONS/cptac_proteomics/case_cptac_published_meta_config.json index 45fece2..265e605 100644 --- a/PUBLICATIONS/cptac_proteomics/case_cptac_published_meta_config.json +++ b/PUBLICATIONS/cptac_proteomics/case_cptac_published_meta_config.json @@ -122,7 +122,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor samples with mutation, CNA and mRNA data", "case_list_description": "All tumor samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -134,7 +134,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/STUDY_CONFIGS/aml_sd_z6mwd3h0_2018_case_meta_config.json b/STUDY_CONFIGS/aml_sd_z6mwd3h0_2018_case_meta_config.json index 13bab5c..0d1c751 100644 --- a/STUDY_CONFIGS/aml_sd_z6mwd3h0_2018_case_meta_config.json +++ b/STUDY_CONFIGS/aml_sd_z6mwd3h0_2018_case_meta_config.json @@ -128,7 +128,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor and model samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor and model samples with mutation, CNA and mRNA data", "case_list_description": "All tumor and model samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -140,7 +140,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/STUDY_CONFIGS/case_cptac_meta_config.json b/STUDY_CONFIGS/case_cptac_meta_config.json index f514513..58550d7 100644 --- a/STUDY_CONFIGS/case_cptac_meta_config.json +++ b/STUDY_CONFIGS/case_cptac_meta_config.json @@ -121,7 +121,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor samples with mutation, CNA and mRNA data", "case_list_description": "All tumor samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -133,7 +133,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/STUDY_CONFIGS/chdm_phs001643_2018_case_meta_config.json b/STUDY_CONFIGS/chdm_phs001643_2018_case_meta_config.json index 69e44e9..d08f011 100644 --- a/STUDY_CONFIGS/chdm_phs001643_2018_case_meta_config.json +++ b/STUDY_CONFIGS/chdm_phs001643_2018_case_meta_config.json @@ -176,7 +176,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor and model samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor and model samples with mutation, CNA and mRNA data", "case_list_description": "All tumor and model samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -188,7 +188,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/STUDY_CONFIGS/chdm_phs002301_2021_case_meta_config.json b/STUDY_CONFIGS/chdm_phs002301_2021_case_meta_config.json index 4af1cf8..c2c3865 100644 --- a/STUDY_CONFIGS/chdm_phs002301_2021_case_meta_config.json +++ b/STUDY_CONFIGS/chdm_phs002301_2021_case_meta_config.json @@ -119,7 +119,7 @@ "study": { "_comment": "see https://docs.cbioportal.org/5.1-data-loading/data-loading/file-formats#cancer-study for detailed specifics", "description": "Chordoma is a rare bone tumor, which is believed to originate from notochordal remnants. Based on the United States Surveillance Epidemiology and End Results (SEER) data, the incidence of chordoma varies by gender and race; however, little is known about the etiologic factors that predispose to it. Genomic profiling studies of chordoma are limited, particularly in the Chinese population. We therefore conducted a detailed molecular characterization of paired chordoma tumor/normal tissues using fresh frozen tissues and blood collected from skull-based Chinese chordoma patients. These analyses included whole exome sequencing and RNA sequencing analyses. For updates, please see here: Release Notes", - "groups": "PUBLIC", + "groups": "phs002301", "cancer_study_identifier": "chdm_phs002301_2021", "type_of_cancer": "chdm", "short_name": "chdm_phs002301_2021", diff --git a/STUDY_CONFIGS/chdm_sd_7spqtt8m_case_meta_config.json b/STUDY_CONFIGS/chdm_sd_7spqtt8m_case_meta_config.json index f0a566a..7b72f71 100644 --- a/STUDY_CONFIGS/chdm_sd_7spqtt8m_case_meta_config.json +++ b/STUDY_CONFIGS/chdm_sd_7spqtt8m_case_meta_config.json @@ -176,7 +176,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor and model samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor and model samples with mutation, CNA and mRNA data", "case_list_description": "All tumor and model samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -188,7 +188,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/STUDY_CONFIGS/oligo_nation_case_meta_config.json b/STUDY_CONFIGS/oligo_nation_case_meta_config.json index 1eb9e98..8cbb308 100644 --- a/STUDY_CONFIGS/oligo_nation_case_meta_config.json +++ b/STUDY_CONFIGS/oligo_nation_case_meta_config.json @@ -133,7 +133,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor samples with mutation, CNA and mRNA data", "case_list_description": "All tumor samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -145,7 +145,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/STUDY_CONFIGS/open_chordoma_case_meta_config.json b/STUDY_CONFIGS/open_chordoma_case_meta_config.json index 6c525ec..99f27d9 100644 --- a/STUDY_CONFIGS/open_chordoma_case_meta_config.json +++ b/STUDY_CONFIGS/open_chordoma_case_meta_config.json @@ -185,7 +185,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor and model samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor and model samples with mutation, CNA and mRNA data", "case_list_description": "All tumor and model samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -197,7 +197,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/STUDY_CONFIGS/os_sd_zxjffmef_2015_case_meta_config.json b/STUDY_CONFIGS/os_sd_zxjffmef_2015_case_meta_config.json index f84196d..62dc9f8 100644 --- a/STUDY_CONFIGS/os_sd_zxjffmef_2015_case_meta_config.json +++ b/STUDY_CONFIGS/os_sd_zxjffmef_2015_case_meta_config.json @@ -128,7 +128,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor and model samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor and model samples with mutation, CNA and mRNA data", "case_list_description": "All tumor and model samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -140,7 +140,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/STUDY_CONFIGS/pbta_all_case_meta_config.json b/STUDY_CONFIGS/pbta_all_case_meta_config.json index c79dfc0..35da286 100644 --- a/STUDY_CONFIGS/pbta_all_case_meta_config.json +++ b/STUDY_CONFIGS/pbta_all_case_meta_config.json @@ -176,7 +176,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor samples with mutation, CNA and mRNA data", "case_list_description": "All tumor samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -188,7 +188,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/STUDY_CONFIGS/pbta_all_treatment_meta_config.json b/STUDY_CONFIGS/pbta_all_treatment_meta_config.json index c5847cc..b6b0360 100644 --- a/STUDY_CONFIGS/pbta_all_treatment_meta_config.json +++ b/STUDY_CONFIGS/pbta_all_treatment_meta_config.json @@ -185,7 +185,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor samples with mutation, CNA and mRNA data", "case_list_description": "All tumor samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -197,7 +197,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/STUDY_CONFIGS/pbta_mioncoseq_case_meta_config.json b/STUDY_CONFIGS/pbta_mioncoseq_case_meta_config.json index 031a3e3..65a0cd7 100644 --- a/STUDY_CONFIGS/pbta_mioncoseq_case_meta_config.json +++ b/STUDY_CONFIGS/pbta_mioncoseq_case_meta_config.json @@ -178,7 +178,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor samples with mutation, CNA and mRNA data", "case_list_description": "All tumor samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -190,7 +190,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, @@ -225,6 +225,16 @@ "table": "bix_genomics_file.sd_bhjxbdqk_mioncoseq-genomics_file_manifest", "file_type": ["RSEM_gene","annofuse_filtered_fusions_tsv","annotated_public_outputs","ctrlfreec_pval","ctrlfreec_info","ctrlfreec_bam_seg"], "out_file": "mioncoseq_genomics_file_manifest.txt" + }, + "x01": { + "table": "bix_genomics_file.sd_bhjxbdqk_x01-genomics_file_manifest", + "file_type": ["RSEM_gene","annofuse_filtered_fusions_tsv","annotated_public_outputs","consensus_public_outputs","ctrlfreec_pval","ctrlfreec_info","ctrlfreec_bam_seg"], + "out_file": "x01_genomics_file_manifest.txt" + }, + "cbtn_extra": { + "table": "bix_genomics_file.sd_bhjxbdqk_x01_extra-genomics_file_manifest", + "file_type": ["RSEM_gene","annofuse_filtered_fusions_tsv","annotated_public_outputs","consensus_public_outputs","ctrlfreec_pval","ctrlfreec_info","ctrlfreec_bam_seg"], + "out_file": "cbtn_extra_genomics_file_manifest.txt" } }, "sample_head": { diff --git a/STUDY_CONFIGS/tll_sd_aq9kvn5p_2019_case_meta_config.json b/STUDY_CONFIGS/tll_sd_aq9kvn5p_2019_case_meta_config.json index 1c0c60f..b2e1c4b 100644 --- a/STUDY_CONFIGS/tll_sd_aq9kvn5p_2019_case_meta_config.json +++ b/STUDY_CONFIGS/tll_sd_aq9kvn5p_2019_case_meta_config.json @@ -176,7 +176,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor samples with mutation, CNA and mRNA data", "case_list_description": "All tumor samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -188,7 +188,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" }, diff --git a/STUDY_CONFIGS/x01_nbl_16_maris_case_meta_config.json b/STUDY_CONFIGS/x01_nbl_16_maris_case_meta_config.json index 25dd629..2f3521e 100644 --- a/STUDY_CONFIGS/x01_nbl_16_maris_case_meta_config.json +++ b/STUDY_CONFIGS/x01_nbl_16_maris_case_meta_config.json @@ -170,7 +170,7 @@ }, "cases_3way_complete": { "stable_id": "3way_complete", - "case_list_name": "Tumor samples with mutatation, CNA and mRNA data", + "case_list_name": "Tumor samples with mutation, CNA and mRNA data", "case_list_description": "All tumor samples with mutation, CNA, and mRNA data", "case_list_category": "all_cases_with_mutation_and_cna_and_mrna_data" }, @@ -182,7 +182,7 @@ }, "cases_cnaseq": { "stable_id": "cnaseq", - "case_list_name": "Tumor samples with mutatation and CNA data", + "case_list_name": "Tumor samples with mutation and CNA data", "case_list_description": "All tumor samples with mutation and CNA data", "case_list_category": "all_cases_with_mutation_and_cna_data" },