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KFDRC Genotyping Production Workflow
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@dmiller15 dmiller15 released this 10 Sep 17:27
· 45 commits to master since this release
v2.1.0
2fc3086

Changes in this release:

  • BWA index tool now stages the reference fasta in the working directory. This change has no effect on the current workflow as BWA index is not run.
  • The Joint Genotyping workflow has received public app formatting: reference files now load automatically in Cavatica, the workflow now has a number of descriptive tags, formatting in general has been cleaned up for readability.
  • Single sample and old non-public-app-formatted Joint Genotyping workflows have been moved to a folder called workflows-deprecated. The workflows still perform as in previous releases but from now on will receive no future updates.
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