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How to build/install the R package ========================== 1. Run roxygen2 to generate/update the R documentation: > setwd("/path/to/Rngqs/parent/dir") > roxygenize("Rngq") 2. Build the package cd /path/to/Rngqs/parent/dir R CMD build Rngq 3. Check the package (you must supply the correct version number): R CMD check Rngq_x.y.tar.gz This may throw a few errors related to XLConnect which is not yet available for R 2.15 which I use on the build system. Simply ignore these errors. However, you should make sure that XLConnect is installed on your system if you would like to store peptide/protein results to MS Excel XML files (.xlsx). 4. Install the package locally R CMD INSTALL Rngq_x.y.tar.gz -M
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R package for NGQ data processing
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