DESCRIPTION

Package: aRchaic
Type: Package
Title: Exploration, Visualization and Clustering of DNA damage patterns
Version: 0.1.3
Date: 2021-01-15
Authors@R: c(
    person("Kushal", "Dey", email = "kkdey@uchicago.edu", role = c("aut","cre")),
    person("Hussein", "Al-Asadi", email = "halasadi@uchicago.edu", role = "aut"),
    person("Matthew", "Stephens", email = "stephens999@gmail.com", role ="ctb"),
    person("John", "Novembre", email="jnovembre@uchicago edu", role="ctb"))
Description: Performs exploratory analysis, visualization, grade of membership clustering and classification of ancient and/or modern DNA samples using DNA damage patterns.
Depends: R (>= 3.4)
License: GPL (>= 2)
URL: https://github.com/kkdey/aRchaic
LazyData: true
Encoding: UTF-8
Imports: 
    ggplot2, 
    plyr,
    dplyr,
    grid,
    gridBase, 
    magrittr,
    maptpx,
    CountClust,
    Logolas
Remotes: 
    kkdey/maptpx, 
    kkdey/CountClust, 
    kkdey/Logolas
Suggests:
    knitr, 
    BiocStyle, 
    Biobase, 
    roxygen2, 
    RColorBrewer, 
    devtools, 
    xtable
VignetteBuilder: knitr
RoxygenNote: 7.1.1