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parallel.md

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VCF format:

- Parse header
- Pedigree (cancer)

Output formatter

- vcf
	- "normal"
	- gatk
	- oicr
	- classic
	- LOF / NMD
	- Custom fields
- bed
- json

Variants

VariantsEffects

- Cancer
	- Needs all variants for comparisson
- LOF (infered from VariantsEffects)
- NMD (infered from VariantsEffects)

- Dependent effects: The impact depeneds on previous effects (e.g. `NON_SYN` vs `SYN`)
	- Interactions: Protein interaction, interaction site, etc.
	- NextProt
		- Highly conserved
		- Phosphorilation site