.travis.yml

dist: trusty
sudo: false
language: python
before_install:
  - export MPLBACKEND='Agg'
  - wget -q https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh
  - export MINICONDA_PREFIX="$HOME/miniconda"
  - bash miniconda.sh -b -p $MINICONDA_PREFIX
  - export PATH="$MINICONDA_PREFIX/bin:$PATH"
  - conda config --set always_yes yes
  - conda update -q conda
  - conda info -a
install:
  - wget -q https://raw.githubusercontent.com/qiime2/environment-files/master/2020.8/release/qiime2-2020.8-py36-linux-conda.yml
  - conda env create -q -n test-env --file qiime2-2020.8-py36-linux-conda.yml
  - source activate test-env
  - conda install -q pytest-cov bokeh
  - conda install -q -c conda-forge xgboost tqdm 'lightgbm<3' sqlalchemy pyyaml
  - pip install -q flake8 coveralls
  - make install
script:
  - make test-cov
  - ./q2_mlab/scripts/test_orchestrator_cli.sh
after_success:
  - coveralls