Release v0.2.7

v0.2.7

Notes

1. Add mugration to workflow.
2. Upgrade auspice to 2.25.1
3. Remove old Jupyter Notebooks
4. Curate host metadata.
5. Consolidate visualization to auspice notebook.

Pull Requests

• pull/7

Commits

• 6e469bc6 update docs for v0.2.7
• 120aa0a0 Merge pull request #7 from ktmeaton/dev
• f0a2d742 update docs
• faa9731e update database
• 65e5dd89 add host as visualization variable
• d6803fbd add plotting map
• 4e0f6de1 add boxplots for rate and tmrca
• 6b039800 fix 0.PE subclades and add blank label
• 51a98838 start experimenting with p-values
• f199b8bb update auspice metadata
• 8ded9416 remove mugration from all targets
• 821de4d4 add temporal constraint plotting and input to tsv
• 4f8eb7b6 reset test outgroup to reference
• c20f5580 start writing bootstrap function
• 7ed6eb6f test linear regression in stats
• 70f780ba remove old jupyter notebooks
• a1034200 add auspice to snakemake
• 9dc376ad add prune target for mugration
• ca46113f create auspice by subtree
• fcfa1dd9 fix reference date in metadata
• See CHANGELOG.md for additional commits.