Merge pull request #59 from kundajelab/dependencyfix

Dependency fix for leidenalg and tqdm
kundajelab · Apr 22, 2020 · 4eb7faf · 4eb7faf
2 parents f2ad2b4 + b2acd30
commit 4eb7faf
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Showing 3 changed files with 6 additions and 3 deletions.
diff --git a/modisco.egg-info/PKG-INFO b/modisco.egg-info/PKG-INFO
@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: modisco
-Version: 0.5.6.0
+Version: 0.5.6.2
 Summary: TF MOtif Discovery from Importance SCOres
 Home-page: https://github.com/kundajelab/tfmodisco
 License: UNKNOWN

diff --git a/modisco.egg-info/requires.txt b/modisco.egg-info/requires.txt
@@ -2,6 +2,8 @@ numpy>=1.9
 joblib>=0.11
 scikit-learn>=0.19
 h5py>=2.5
+leidenalg>=0.7.0
+tqdm>=4.38.0
 
 [tensorflow]
 tensorflow>=1.7

diff --git a/setup.py b/setup.py
@@ -6,7 +6,7 @@
           description='TF MOtif Discovery from Importance SCOres',
           long_description="""Algorithm for discovering consolidated patterns from base-pair-level importance scores""",
           url='https://github.com/kundajelab/tfmodisco',
-          version='0.5.6.0',
+          version='0.5.6.2',
           packages=find_packages(),
           package_data={
                 '': ['cluster/phenograph/louvain/*convert*', 'cluster/phenograph/louvain/*community*', 'cluster/phenograph/louvain/*hierarchy*']
@@ -15,7 +15,8 @@
           setup_requires=[],
           install_requires=['numpy>=1.9', 'joblib>=0.11', 
                             'scikit-learn>=0.19',
-                            'h5py>=2.5'],
+                            'h5py>=2.5', 'leidenalg>=0.7.0',
+                            'tqdm>=4.38.0'],
           extras_require={
             'tensorflow': ['tensorflow>=1.7'],
             'tensorflow with gpu': ['tensorflow-gpu>=1.7']},