Merge pull request #29 from kundajelab/hotfix

Fixed bug in loading of reverse-complement seqlets

modisco.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: modisco
-Version: 0.4.2.0
+Version: 0.4.2.1
 Summary: TF MOtif Discovery from Importance SCOres
 Home-page: NA
 License: UNKNOWN

modisco/core.py

@@ -72,7 +72,7 @@ def get_snippet(self, coor):
                     has_pos_axis=self.has_pos_axis)
         else:
             assert coor.start >= 0
-            assert len(self.fwd_tracks[coor.example_idx]) >= coor.end
+            assert len(self.fwd_tracks[coor.example_idx]) >= coor.end, coor.end
             snippet = Snippet(
                     fwd=self.fwd_tracks[coor.example_idx][coor.start:coor.end],
                     rev=self.rev_tracks[
@@ -460,7 +460,7 @@ def from_string(self, string):
         example_idx = int(example_info.split(":")[1])
         start = int(start_info.split(":")[1])
         end = int(end_info.split(":")[1])
-        rc = True if rc_info.split(":")[1] is "True" else False
+        rc = True if (rc_info.split(":")[1] == "True") else False
         return SeqletCoordinates(example_idx=example_idx, start=start,
                                  end=end, is_revcomp=rc)
 

setup.py

@@ -5,7 +5,7 @@
           description='TF MOtif Discovery from Importance SCOres',
           url='NA',
           download_url='NA',
-          version='0.4.2.0',
+          version='0.4.2.1',
           packages=['modisco', 'modisco.cluster','modisco.backend',
                     'modisco.visualization', 'modisco.affinitymat',
                     'modisco.tfmodisco_workflow', 'modisco.hit_scoring'],