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Can't cythonize on MacOSX, unlike Ubuntu #3

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shabnamkadir opened this issue Aug 6, 2015 · 0 comments
Open

Can't cythonize on MacOSX, unlike Ubuntu #3

shabnamkadir opened this issue Aug 6, 2015 · 0 comments
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@shabnamkadir
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(globalphy)physiol-95026:global_code shabnamkadir$ python setup.py build_ext --inplace
running build_ext
building 'supercluster' extension
/usr/bin/clang -fno-strict-aliasing -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/Users/shabnamkadir/miniconda/envs/globalphy/include -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.5.sdk -I/Users/shabnamkadir/miniconda/envs/globalphy/include/python3.4m -c supercluster.cpp -o build/temp.macosx-10.5-x86_64-3.4/supercluster.o
supercluster.cpp:266:10: fatal error: 'numpy/arrayobject.h' file not found

include "numpy/arrayobject.h"

     ^

1 error generated.
error: command '/usr/bin/clang' failed with exit status 1
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