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@labsyspharm

Laboratory of Systems Pharmacology @ Harvard

Reinventing the fundamental science underlying the development of new medicines and their use in individual patients.

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  1. ashlar ashlar Public

    ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration

    Python 119 42

  2. mcmicro mcmicro Public

    Multiple-choice microscopy pipeline

    Nextflow 103 58

  3. scimap scimap Public

    Spatial Single-Cell Analysis Toolkit

    Python 72 24

  4. minerva-story minerva-story Public

    Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue images.

    HTML 50 14

  5. minerva_analysis minerva_analysis Public

    JavaScript 24 6

  6. cylinter cylinter Public

    An Interactive Image Segmentation Filter for Multiplex Microscopy

    Python 22 11

Repositories

Showing 10 of 153 repositories
  • harvardtissueatlas Public

    Harvard Tissue Atlas website

    labsyspharm/harvardtissueatlas’s past year of commit activity
    SCSS 3 6 3 0 Updated Sep 19, 2024
  • okl-analysis Public
    labsyspharm/okl-analysis’s past year of commit activity
    Python 0 0 0 0 Updated Sep 19, 2024
  • gater Public
    labsyspharm/gater’s past year of commit activity
    JavaScript 1 MIT 3 0 1 Updated Sep 16, 2024
  • minerva_analysis Public
    labsyspharm/minerva_analysis’s past year of commit activity
    JavaScript 24 MIT 6 21 4 Updated Sep 16, 2024
  • palom Public

    Piecewise alignment for layers of mosaics

    labsyspharm/palom’s past year of commit activity
    Python 18 MIT 4 4 2 Updated Sep 14, 2024
  • ad-personalized Public
    labsyspharm/ad-personalized’s past year of commit activity
    R 0 0 0 0 Updated Sep 13, 2024
  • minerva-author-ui Public

    Minerva Author is an authoring tool used to create Minerva narrated stories via selection of specific channel groupings and image views.

    labsyspharm/minerva-author-ui’s past year of commit activity
    JavaScript 4 MIT 5 2 4 Updated Sep 12, 2024
  • cycif.org Public

    cycif.org GitHub Pages Website

    labsyspharm/cycif.org’s past year of commit activity
    JavaScript 2 MIT 9 4 4 Updated Sep 12, 2024
  • mel-3d-mis Public
    labsyspharm/mel-3d-mis’s past year of commit activity
    MATLAB 0 1 0 0 Updated Sep 11, 2024
  • omero-oauth Public Forked from microscopepony/omero-oauth

    OMERO.web application to allow OAuth2 login to OMERO

    labsyspharm/omero-oauth’s past year of commit activity
    Python 1 AGPL-3.0 3 0 0 Updated Sep 10, 2024
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