Solutions to the bioinformatics problems presented on Rosalind http://rosalind.info
ID | Title | Notes |
---|---|---|
DNA | Counting DNA Nucleotides | |
RNA | Transcribing DNA into RNA | |
REVC | Complementing a Strand of DNA | |
FIB | Rabbits and Recurrence Relations | |
GC | Computing GC Content | |
HAMM | Counting Point Mutations | |
PROT | Translating RNA into Protein | |
SUBS | Finding a Motif in DNA | Overlapping string search |
CONS | Consensus and Profile | |
GRPH | Overlap Graphs | Fun graph structures |
ORF | Open Reading Frames | |
PERM | Enumerating Gene Orders | Heap's algorithm for permutations |
PRTM | Calculating Protein Mass | |
IPRB | Mendel's First Law | |
MPRT | Finding a Protein Motif | Implemented a backtracking DFA |
REVP | Locating Restriction Sites | OCaml |
SPLC | RNA Splicing | |
PROB | Introduction to Random Strings | |
KMP | Speeding Up Motif Finding | |
FIBD | Mortal Fibonacci Rabbits | |
LCSM | Finding a Shared Motif | |
LEXF | Enumerating k-mers Lexicographically | |
MRNA | Inferring mRNA from Protein | |
LONG | Genome Assembly as Shortest Superstring | |
PMCH | Perfect Matchings and RNA Secondary Structures | |
SIGN | Enumerating Oriented Gene Orderings | |
IEV | Calculating Expected Offspring | |
LIA | Independent Alleles | |
LGIS | Longest Increasing Subsequence | |
PPER | Partial Permutations | |
SSEQ | Finding a Spliced Motif | |
TRAN | Transitions and Transversions | |
TREE | Completing a Tree |