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qcf_neb.nextchain handles the first NEB step instead of qcf_neb.prepare #159

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merged 4 commits into from
Sep 10, 2023

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@hjnpark hjnpark commented Jul 18, 2023

neb.CalcInternalStep calculates eigenvalues of the Hessian to take the very first step of NEB through qcf_neb.prepare. When an NEB chain consists of many images of big molecules, the eigenvalue calculation requires significant amount of CPUs and memory. This can be a problem when a couple of hundred NEB services are running concurrently in a QCFractal server. This is solved by passing the first step procedure to qcf_neb.nextchain as it is already handled by workers.

Scipy was added into setup.py as well.

@leeping leeping merged commit 7e6e7c6 into leeping:master Sep 10, 2023
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