Merge branch 'develop'

lemieuxl · Feb 17, 2016 · 9d4abab · 9d4abab
2 parents 6f8c35c + 5d10f69
commit 9d4abab
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Showing 4 changed files with 7 additions and 7 deletions.
diff --git a/docs/index.rst b/docs/index.rst
@@ -39,7 +39,7 @@ operating systems. Its usage is shown below:
                           [--report-number NUMBER]
                           [--report-background BACKGROUND] --conf FILE
 
-    Runs the data clean up (pyGenClean version 1.8.0).
+    Runs the data clean up (pyGenClean version 1.8.2).
 
     optional arguments:
       -h, --help            show this help message and exit

diff --git a/docs/module_content/modules.rst b/docs/module_content/modules.rst
@@ -11,7 +11,7 @@ Here is the usage of the main pipeline.
                           [--report-number NUMBER]
                           [--report-background BACKGROUND] --conf FILE
 
-    Runs the data clean up (pyGenClean version 1.8.0).
+    Runs the data clean up (pyGenClean version 1.8.2).
 
     optional arguments:
       -h, --help            show this help message and exit

diff --git a/pyGenClean/run_data_clean_up.py b/pyGenClean/run_data_clean_up.py
@@ -956,8 +956,8 @@ def run_sample_missingness(in_prefix, in_type, out_prefix, base_dir, options):
     # Writing the summary results
     with open(os.path.join(base_dir, "results_summary.txt"), "a") as o_file:
         print >>o_file, "# {}".format(script_prefix)
-        print >>o_file, ("Number of samples with missing rate less or equal "
-                         "to {t}\t{nb:,d}\t\t-{nb:,d}".format(
+        print >>o_file, ("Number of samples with missing rate higher "
+                         "than {t}\t{nb:,d}\t\t-{nb:,d}".format(
                             t=mind_value,
                             nb=nb_samples,
                          ))
@@ -1078,8 +1078,8 @@ def run_snp_missingness(in_prefix, in_type, out_prefix, base_dir, options):
     # Writing the summary results
     with open(os.path.join(base_dir, "results_summary.txt"), "a") as o_file:
         print >>o_file, "# {}".format(script_prefix)
-        print >>o_file, ("Number of markers with missing rate less or equal "
-                         "to {t}\t{nb:,d}\t-{nb:,d}".format(
+        print >>o_file, ("Number of markers with missing rate higher "
+                         "than {t}\t{nb:,d}\t-{nb:,d}".format(
                             t=geno_value,
                             nb=nb_markers,
                          ))

diff --git a/setup.py b/setup.py
@@ -21,7 +21,7 @@
 
 MAJOR = 1
 MINOR = 8
-MICRO = 1
+MICRO = 2
 VERSION = "{0}.{1}.{2}".format(MAJOR, MINOR, MICRO)