Prepare release

.github/workflows/cldf-validation.yml

@@ -12,7 +12,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [3.9]
+        python-version: [3.12]
 
     steps:
     - uses: actions/checkout@v2

README.md

@@ -27,8 +27,8 @@ Conceptlists in Concepticon:
 ![BIPA: 100%](https://img.shields.io/badge/BIPA-100%25-brightgreen.svg "BIPA: 100%")
 ![CLTS SoundClass: 100%](https://img.shields.io/badge/CLTS%20SoundClass-100%25-brightgreen.svg "CLTS SoundClass: 100%")
 
-- **Varieties:** 10
-- **Concepts:** 300
+- **Varieties:** 10 (linked to 10 different Glottocodes)
+- **Concepts:** 300 (linked to 285 different Concepticon concept sets)
 - **Lexemes:** 2,998
 - **Sources:** 1
 - **Synonymy:** 1.00

cldf/README.md

@@ -13,8 +13,8 @@ property | value
 [dc:format](http://purl.org/dc/terms/format) | <ol><li>http://concepticon.clld.org/contributions/Othaniel-2017-300</li></ol>
 [dc:license](http://purl.org/dc/terms/license) | https://creativecommons.org/licenses/by/4.0/
 [dcat:accessURL](http://www.w3.org/ns/dcat#accessURL) | https://github.com/lexibank/othanieljen
-[prov:wasDerivedFrom](http://www.w3.org/ns/prov#wasDerivedFrom) | <ol><li><a href="https://github.com/lexibank/othanieljen/tree/85404fa">lexibank/othanieljen 85404fa</a></li><li><a href="https://github.com/glottolog/glottolog/tree/v4.8">Glottolog v4.8</a></li><li><a href="https://github.com/concepticon/concepticon-data/tree/v3.1.0">Concepticon v3.1.0</a></li><li><a href="https://github.com/cldf-clts/clts/tree/v2.2.0">CLTS v2.2.0</a></li></ol>
-[prov:wasGeneratedBy](http://www.w3.org/ns/prov#wasGeneratedBy) | <ol><li><strong>lingpy-rcParams</strong>: <a href="./lingpy-rcParams.json">lingpy-rcParams.json</a></li><li><strong>python</strong>: 3.10.12</li><li><strong>python-packages</strong>: <a href="./requirements.txt">requirements.txt</a></li></ol>
+[prov:wasDerivedFrom](http://www.w3.org/ns/prov#wasDerivedFrom) | <ol><li><a href="https://github.com/lexibank/othanieljen/tree/v1.0">lexibank/othanieljen v1.0</a></li><li><a href="https://github.com/glottolog/glottolog/tree/v5.0">Glottolog v5.0</a></li><li><a href="https://github.com/concepticon/concepticon-data/tree/v3.2.0">Concepticon v3.2.0</a></li><li><a href="https://github.com/cldf-clts/clts/tree/v2.3.0">CLTS v2.3.0</a></li></ol>
+[prov:wasGeneratedBy](http://www.w3.org/ns/prov#wasGeneratedBy) | <ol><li><strong>lingpy-rcParams</strong>: <a href="./lingpy-rcParams.json">lingpy-rcParams.json</a></li><li><strong>python</strong>: 3.12.4</li><li><strong>python-packages</strong>: <a href="./requirements.txt">requirements.txt</a></li></ol>
 [rdf:ID](http://www.w3.org/1999/02/22-rdf-syntax-ns#ID) | othanieljen
 [rdf:type](http://www.w3.org/1999/02/22-rdf-syntax-ns#type) | http://www.w3.org/ns/dcat#Distribution
 

cldf/cldf-metadata.json

@@ -16,25 +16,25 @@
         {
             "rdf:about": "https://github.com/lexibank/othanieljen",
             "rdf:type": "prov:Entity",
-            "dc:created": "85404fa",
+            "dc:created": "v1.0",
             "dc:title": "Repository"
         },
         {
             "rdf:about": "https://github.com/glottolog/glottolog",
             "rdf:type": "prov:Entity",
-            "dc:created": "v4.8",
+            "dc:created": "v5.0",
             "dc:title": "Glottolog"
         },
         {
             "rdf:about": "https://github.com/concepticon/concepticon-data",
             "rdf:type": "prov:Entity",
-            "dc:created": "v3.1.0",
+            "dc:created": "v3.2.0",
             "dc:title": "Concepticon"
         },
         {
             "rdf:about": "https://github.com/cldf-clts/clts",
             "rdf:type": "prov:Entity",
-            "dc:created": "v2.2.0",
+            "dc:created": "v2.3.0",
             "dc:title": "CLTS"
         }
     ],
@@ -45,7 +45,7 @@
         },
         {
             "dc:title": "python",
-            "dc:description": "3.10.12"
+            "dc:description": "3.12.4"
         },
         {
             "dc:title": "python-packages",

cldf/lingpy-rcParams.json

@@ -64,7 +64,7 @@
         10,
         10
     ],
-    "filename": "lingpy-2023-12-19",
+    "filename": "lingpy-2024-08-01",
     "gap_symbol": "-",
     "gap_weight": 0.5,
     "gop": -2,
@@ -123,7 +123,7 @@
     "scorer": {},
     "sonar": true,
     "stress": "\u02c8\u02cc'",
-    "timestamp": "2023-12-19 08:30",
+    "timestamp": "2024-08-01 09:04",
     "tones": "\u00b9\u00b2\u00b3\u2074\u2075\u2076\u2077\u2078\u2079\u2070\u2081\u2082\u2083\u2084\u2085\u2086\u2087\u2088\u2089\u20800123456789\u02e5\u02e6\u02e7\u02e8\u02e9\u02ea\u02eb-\ua708-\ua709-\ua70a-\ua70b-\ua70c-\ua70d-\ua70e-\ua70f-\ua710-\ua711-\ua712-\ua713-\ua714-\ua715-\ua716-\ua717-\ua718-\ua719-\ua71a-\ua700-\ua701-\ua702-\ua703-\ua704-\ua705-\ua706-\ua707",
     "tree_calc": "neighbor",
     "unique_sequences": true,

cldf/requirements.txt

@@ -1,58 +1,56 @@
 appdirs==1.4.4
-attrs==23.1.0
-Babel==2.14.0
-bibtexparser==2.0.0b4
-bs4==0.0.1
-certifi==2023.11.17
+attrs==23.2.0
+Babel==2.15.0
+bibtexparser==2.0.0b7
+bs4==0.0.2
+certifi==2024.7.4
 cldfbench==1.14.0
 cldfcatalog==1.5.1
-cldfzenodo==2.1.0
-clldutils==3.22.1
+cldfzenodo==2.1.1
+clldutils==3.22.2
 colorama==0.4.6
-colorlog==6.8.0
-csvw==3.2.1
-exceptiongroup==1.2.0
+colorlog==6.8.2
+csvw==3.3.0
 gitdb==4.0.11
-greenlet==3.0.2
-idna==3.6
+greenlet==3.0.3
+idna==3.7
 iniconfig==2.0.0
 isodate==0.6.1
-jsonschema==4.20.0
+jsonschema==4.23.0
 lingpy==2.6.13
-lxml==4.9.3
-Markdown==3.5.1
+lxml==5.2.2
+Markdown==3.6
 nameparser==1.1.3
-networkx==3.2.1
+networkx==3.3
 newick==1.9.0
-numpy==1.26.2
-openpyxl==3.1.2
-packaging==23.2
-pluggy==1.3.0
-purl==1.6
+numpy==2.0.1
+openpyxl==3.1.5
+packaging==24.1
+pluggy==1.5.0
 pybtex==0.24.0
-pycldf==1.36.0
-pyclts==3.1.1
-pyconcepticon==3.0.0
-pycountry==23.12.11
-pyglottolog==3.12.0
+pycldf==1.38.1
+pyclts==3.2.0
+pyconcepticon==3.1.0
+pycountry==24.6.1
+pyglottolog==3.13.0
 pylatexenc==2.10
-pylexibank==3.4.0
-pytest==7.4.3
-python-dateutil==2.8.2
+pylexibank==3.5.0
+pytest==8.3.2
+python-dateutil==2.9.0.post0
 rdflib==7.0.0
-referencing==0.32.0
-regex==2023.10.3
-requests==2.31.0
+referencing==0.35.1
+regex==2024.7.24
+requests==2.32.3
 rfc3986==1.5.0
 segments==2.2.1
 six==1.16.0
 smmap==5.0.1
 soupsieve==2.5
-SQLAlchemy==1.4.50
+SQLAlchemy==1.4.53
 tabulate==0.9.0
 termcolor==2.4.0
-tqdm==4.66.1
+tqdm==4.66.4
 uritemplate==4.1.1
-urllib3==2.1.0
+urllib3==2.2.2
 xlrd==2.0.1
 zenodoclient==0.5.1

etc/orthography.tsv

@@ -42,7 +42,6 @@ ow	ou
 hw	hʷ
 Ɂd	ˀd
 ^*k-hneᴬ	k Ø/ə + hn/n̥ e ᴬ/⁵⁵
-kw	kʷ
 s	s	70	U+0073
 ʃ	ʃ	70	U+0283
 é	é/e	65	U+00e9
@@ -255,7 +254,6 @@ u᷇	u᷇/u	1	U+0075 U+1dc7
 ǔː	ǔː/uː	1	U+01d4 U+02d0
 ʒw	ʒʷ	1	U+0292 U+0077
 ɲ̩̀̀ɲ	ɲ̩̀̀/ɲ̍ ɲ
-a̤᷇	a̤᷇/a
 ŋ̩̀̀g	ŋ̩̀̀/ŋ̍ g
 ^ŋ̩̀̀g	ŋ̩̀̀/ŋ̍ g
 mùŋ̩́	m ù/u ŋ
@@ -272,7 +270,6 @@ zə̀ŋ)	z ə̀/ə ŋ	1	U+007a U+0259 U+0300 U+014b U+0029
 ɨ̀̀	ɨ̀/ɨ	1	U+0268 U+0300 U+0300
 ɡ	g	1	U+0261
 ɔ᷇	ɔ᷇/ɔ	1	U+0254 U+1dc7
-hw	hʷ	1	U+0068 U+0077
 ìw	ì/i w	1	U+00ec U+0077
 īsw	ī/i sʷ	1	U+012b U+0073 U+0077
 o᷇	o᷇/o	1	U+006f U+1dc7

lexibank_othanieljen.py

@@ -8,9 +8,10 @@ class Dataset(pylexibank.Dataset):
     id = "othanieljen"
 
     form_spec = pylexibank.FormSpec(
-        brackets={"(": ")"}, missing_data=("", " ", "-"), 
+        brackets={"(": ")"},
+        missing_data=("", " ", "-"),
         replacements=[("ɗɨ̀ŋvi ̀", "ɗɨ̀ŋvi"), (" ", "_")],
-        strip_inside_brackets=True
+        strip_inside_brackets=True,
     )
 
     def cmd_makecldf(self, args):

setup.cfg

@@ -1,5 +1,4 @@
 [tool:pytest]
 testpaths = test.py
-mock_use_standalone_module = true
 addopts =
   --cldf-metadata=cldf/cldf-metadata.json