-
Notifications
You must be signed in to change notification settings - Fork 2
/
NAMESPACE
97 lines (96 loc) · 2.18 KB
/
NAMESPACE
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
# Generated by roxygen2: do not edit by hand
export(Fread)
export(Init)
export(Plot)
export(Robj_md5sum)
export(ancombc_tidy)
export(ancombc_unbiased_abundances)
export(as.Num)
export(bash_job)
export(beta2mtx)
export(calc_PCoA)
export(calc_alpha_div)
export(calc_beta_div)
export(calculate_rarefaction_curves)
export(cat_file)
export(clustermq_get_logs)
export(clustermq_logfile)
export(clustermq_setup)
export(condaInfo)
export(df.dims)
export(dfhead)
export(dist_format)
export(ena_get_filereport)
export(ena_get_search_fields)
export(estimate_rarified_richness)
export(estimate_richness_phy)
export(expand.grid.lower)
export(extract_pltdt)
export(fig_uuid)
export(files_to_list)
export(itol_boxplot)
export(itol_colorstrip)
export(itol_externalshape)
export(itol_heatmap)
export(itol_multibar)
export(itol_simplebar)
export(itol_symbol)
export(list_files)
export(make_dir)
export(mgnify_get)
export(mgnify_request)
export(mgnify_request_get)
export(ml_tax_HFE)
export(mlr_boruta_filter)
export(mlr_getNestedTuneResultsOptPathDf)
export(overlap)
export(p.dims)
export(path_get_label)
export(pcoa2df)
export(phyloseq2df)
export(phyloseq_rel_abund)
export(pipelineInfo)
export(qsave_obj)
export(readLinesTail)
export(read_bracken)
export(read_eggnog_mapper)
export(row_means)
export(row_sums)
export(scale_color_all)
export(scale_fill_all)
export(send_email)
export(size_objects)
export(snakemakeInfo)
export(split_path)
export(summary_x)
export(taxonomy_levels)
export(tidy_pcoa)
export(to_rds)
export(unique_n)
export(well2index)
export(write_table)
import(data.table)
import(rlang, except = `:=`)
import(tidyselect)
import(tidytable)
importFrom(data.table,as.data.table)
importFrom(data.table,fread)
importFrom(data.table,fwrite)
importFrom(data.table,rbindlist)
importFrom(dplyr,distinct)
importFrom(dplyr,enquo)
importFrom(dplyr,filter)
importFrom(dplyr,mutate)
importFrom(dplyr,pull)
importFrom(ggplot2,enexpr)
importFrom(ggplot2,ggsave)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_manual)
importFrom(glue,glue)
importFrom(plyr,llply)
importFrom(rlang,as_string)
importFrom(tibble,as_tibble)
importFrom(tidyr,gather)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)
importFrom(tidyr,spread)