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35 changes: 16 additions & 19 deletions CONDUCT.html
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<div itemprop="articleBody">

<section id="contributor-code-of-conduct">
<h1>Contributor Code of Conduct<a class="headerlink" href="#contributor-code-of-conduct" title="Permalink to this heading"></a></h1>
<h1>Contributor Code of Conduct<a class="headerlink" href="#contributor-code-of-conduct" title="Link to this heading"></a></h1>
<p>As contributors and maintainers of this project, we pledge to respect all people who contribute through reporting issues, posting feature requests, updating documentation, submitting pull requests or patches, and other activities.</p>
<p>We are committed to making participation in this project a harassment-free experience for everyone, regardless of level of experience, gender, gender identity and expression, sexual orientation, disability, personal appearance, body size, race, ethnicity, age, or religion.</p>
<p>Examples of unacceptable behaviour by participants include the use of sexual language or imagery, derogatory comments or personal attacks, trolling, public or private harassment, insults, or other unprofessional conduct.</p>
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39 changes: 18 additions & 21 deletions CONTRIBUTING.html
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<!DOCTYPE html>
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<title>Contributing &mdash; LHCb Starterkit Lessons documentation</title>
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<div itemprop="articleBody">

<section id="contributing">
<h1>Contributing<a class="headerlink" href="#contributing" title="Permalink to this heading"></a></h1>
<h1>Contributing<a class="headerlink" href="#contributing" title="Link to this heading"></a></h1>
<p><a class="reference external" href="https://github.com/lhcb/starterkit-lessons">starterkit-lessons</a> is an open source project, and we welcome contributions of all kinds:</p>
<ul class="simple">
<li><p>New lessons;</p></li>
Expand All @@ -266,7 +263,7 @@ <h1>Contributing<a class="headerlink" href="#contributing" title="Permalink to t
<p>By contributing, you are agreeing that we may redistribute your work under <a class="reference internal" href="LICENSE.html"><span class="doc">these licenses</span></a>.
You also agree to abide by our <a class="reference internal" href="CONDUCT.html"><span class="doc">contributor code of conduct</span></a>.</p>
<section id="getting-started">
<h2>Getting Started<a class="headerlink" href="#getting-started" title="Permalink to this heading"></a></h2>
<h2>Getting Started<a class="headerlink" href="#getting-started" title="Link to this heading"></a></h2>
<ol class="simple">
<li><p>We use the <a class="reference external" href="https://reflectoring.io/github-fork-and-pull/">fork and pull</a> model to manage changes.
More information about <a class="reference external" href="https://help.github.com/en/articles/fork-a-repo">forking a repository</a> and <a class="reference external" href="https://help.github.com/en/articles/about-pull-requests">making a Pull Request</a>.</p></li>
Expand All @@ -278,7 +275,7 @@ <h2>Getting Started<a class="headerlink" href="#getting-started" title="Permalin
</ol>
</section>
<section id="dependencies">
<h2>Dependencies<a class="headerlink" href="#dependencies" title="Permalink to this heading"></a></h2>
<h2>Dependencies<a class="headerlink" href="#dependencies" title="Link to this heading"></a></h2>
<p>To build the lessons locally, install the following:</p>
<ol class="simple">
<li><p><a class="reference external" href="https://pypi.org/project/starterkit-ci/">starterkit-ci</a></p></li>
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37 changes: 17 additions & 20 deletions LICENSE.html
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<div itemprop="articleBody">

<section id="instructional-material">
<h1>Instructional Material<a class="headerlink" href="#instructional-material" title="Permalink to this heading"></a></h1>
<h1>Instructional Material<a class="headerlink" href="#instructional-material" title="Link to this heading"></a></h1>
<p>All instructional material is made available under the <a class="reference external" href="https://creativecommons.org/licenses/by/4.0/">Creative Commons
Attribution license</a>. The following is a human-readable summary of
(and not a substitute for) the <a class="reference external" href="https://creativecommons.org/licenses/by/4.0/legalcode">full legal text of the CC BY 4.0
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</ul>
</section>
<section id="software">
<h1>Software<a class="headerlink" href="#software" title="Permalink to this heading"></a></h1>
<h1>Software<a class="headerlink" href="#software" title="Link to this heading"></a></h1>
<p>Except where otherwise noted, the example programs and other software provided
by Software Carpentry are made available under the <a class="reference external" href="https://opensource.org">OSI</a>-approved <a class="reference external" href="https://opensource.org/licenses/mit-license.html">MIT
license</a>.</p>
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2 changes: 1 addition & 1 deletion _sources/first-analysis-steps/files-from-grid.md.txt
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Expand Up @@ -47,7 +47,7 @@ Lots of people downloading the same file at the same time can be very slow.
As a workaround, the file is also available on EOS, and can be downloaded to
your current directory with the following command:
```bash
$ xrdcp root://eosuser.cern.ch//eos/user/l/lhcbsk/data-sets/00070793_00000001_7.AllStreams.dst .
$ xrdcp root://eoslhcb.cern.ch//eos/lhcb/wg/dpa/wp7/Run2SK/files-from-grid/00070793_00000001_7.AllStreams.dst .
```

{% endcallout %}
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2 changes: 1 addition & 1 deletion _sources/second-analysis-steps/rerun-stripping.md.txt
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Expand Up @@ -27,7 +27,7 @@ Take a look at the file and try to find out what has changed compared to the [mi
Lots of people downloading the same file at the same time can be very slow.
The file in the minimal DaVinci example can be copied using this command:
```bash
$ xrdcp root://eosuser.cern.ch//eos/user/l/lhcbsk/impactkit/00070793_00000001_7.AllStreams.dst .
$ xrdcp root://eoslhcb.cern.ch//eos/lhcb/wg/dpa/wp7/Run2SK/files-from-grid/00070793_00000001_7.AllStreams.dst .
```

{% endcallout %}
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4 changes: 2 additions & 2 deletions _sources/second-analysis-steps/simulation-gencuts.md.txt
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Expand Up @@ -61,7 +61,7 @@ The second option is usually easier and in the example used so far only requires
Generation().SignalPlain.CutTool = ""
```
which must be included after `27163003.py` is sourced (e.g. in `Gauss-Job.py`). You can convince yourself that this alters the observed
distributions and leads to a generator level cut efficiency of 100%. A large sample can be found on EOS: `root://eosuser.cern.ch//eos/user/l/lhcbsk/sim-lesson-2019/Gauss-27175000-modified-50000ev-20190515.xgen` (includes additional resonance added above).
distributions and leads to a generator level cut efficiency of 100%. A large sample can be found on EOS: `root://eoslhcb.cern.ch//eos/lhcb/wg/dpa/wp7/Run2SK/simulation/Gauss-27175000-modified-50000ev-20241216.xgen` (includes additional resonance added above).
Have a look at the pseudorapidity distribution of the head particle. This illustrates another default behavior of the generation of signal decays in Gauss: The generated events' z-axis if inverted if the selected signal particle's momentum along that axis is negative.


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'[mu+]cc': 'inAcc'
}
```
You can again check that this works and a larger sample of 10,000 events can be found `root://eosuser.cern.ch//eos/user/l/lhcbsk/sim-lesson/GaussTightCut-27163003-10000ev.xgen`
You can again check that this works and a larger sample of 10,000 events can be found `root://eoslhcb.cern.ch//eos/lhcb/wg/dpa/wp7/Run2SK/simulation/GaussTightCut-27175000-10000ev-20241216.xgen`
.
You might also notice a slight slow-down in the rate at which events are produced: by default,
an event failing the generator cut (which is applied after Pythia and EvtGen are done) triggers a reset of
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2 changes: 1 addition & 1 deletion _sources/second-analysis-steps/simulation-running-gauss.md.txt
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Expand Up @@ -87,7 +87,7 @@ See if you can generate a generator level only sample for event type `27175000`
## Make an nTuple

The `.xgen` file can be processed into something more usable (copied together from [here](https://gitlab.cern.ch/lhcb-datapkg/Gen/DecFiles/blob/master/CONTRIBUTING.md#)).
A larger input file containing 50,000 generated events for event-type can be found on EOS: `root://eosuser.cern.ch//eos/user/l/lhcbsk/sim-lesson-2019/Gauss-27175000-50000ev-20190515.xgen`.
A larger input file containing 50,000 generated events for event-type can be found on EOS: `root://eoslhcb.cern.ch//eos/lhcb/wg/dpa/wp7/Run2SK/simulation/Gauss-27175000-50000ev-20241216.xgen`.
```python
"""Configure the variables below with:
decay: Decay you want to inspect, using 'newer' LoKi decay descriptor syntax,
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17 changes: 3 additions & 14 deletions _static/_sphinx_javascript_frameworks_compat.js
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/*
* _sphinx_javascript_frameworks_compat.js
* ~~~~~~~~~~
*
* Compatability shim for jQuery and underscores.js.
*
* WILL BE REMOVED IN Sphinx 6.0
* xref RemovedInSphinx60Warning
/* Compatability shim for jQuery and underscores.js.
*
* Copyright Sphinx contributors
* Released under the two clause BSD licence
*/

/**
* select a different prefix for underscore
*/
$u = _.noConflict();


/**
* small helper function to urldecode strings
*
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/*
* basic.css
* ~~~~~~~~~
*
* Sphinx stylesheet -- basic theme.
*
* :copyright: Copyright 2007-2022 by the Sphinx team, see AUTHORS.
* :license: BSD, see LICENSE for details.
*
*/

/* -- main layout ----------------------------------------------------------- */
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/* -- search page ----------------------------------------------------------- */

ul.search {
margin: 10px 0 0 20px;
padding: 0;
margin-top: 10px;
}

ul.search li {
padding: 5px 0 5px 20px;
background-image: url(file.png);
background-repeat: no-repeat;
background-position: 0 7px;
padding: 5px 0;
}

ul.search li a {
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visibility: hidden;
}

a:visited {
color: #551A8B;
}

h1:hover > a.headerlink,
h2:hover > a.headerlink,
h3:hover > a.headerlink,
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p.sidebar-title {
font-weight: bold;
}

nav.contents,
aside.topic,
div.admonition, div.topic, blockquote {
clear: left;
}

/* -- topics ---------------------------------------------------------------- */

nav.contents,
aside.topic,
div.topic {
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ul.simple p {
margin-bottom: 0;
}

aside.footnote > span,
div.citation > span {
float: left;
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margin-left: 30px;
}

.sig dd {
margin-top: 0px;
margin-bottom: 0px;
}

.sig dl {
margin-top: 0px;
margin-bottom: 0px;
}

dl > dd:last-child,
dl > dd:last-child > :last-child {
margin-bottom: 0;
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cursor: help;
}

.translated {
background-color: rgba(207, 255, 207, 0.2)
}

.untranslated {
background-color: rgba(255, 207, 207, 0.2)
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pre {
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